RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 POSTNQ15063 836 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 NCAPH2Q6IBW4 605 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
PTPN9-201ENST00000306726 GREM2Q9H772 168 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 SRGAP2O75044 1071 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 CDKL5O76039 1030 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 RTN1Q16799 776 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 PTF1AQ7RTS3 328 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 VAT1LQ9HCJ6 419 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 ANKRD36CQ5JPF3 1778 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 CASP14P31944 242 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 WTAPQ15007 396 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 KIAA1328Q86T90 577 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 STK32BQ9NY57 414 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 CCDC175P0C221 793 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 ATG9AQ7Z3C6 839 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 ZNF274Q96GC6 653 aaPredicted RBP16.56■□□□□ 0.24
PTPN9-201ENST00000306726 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 CMA1P23946 247 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 FOXP4Q8IVH2 680 aaPredicted RBP16.56■□□□□ 0.24
PTPN9-201ENST00000306726 CAMKK2Q96RR4 588 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
PTPN9-201ENST00000306726 CCP110O43303 1012 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
PTPN9-201ENST00000306726 ANTXR2P58335 489 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 RBL2Q08999 1139 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 SLC39A14Q15043 492 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 APOA5Q6Q788 366 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 SARM1Q6SZW1 724 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 SMIM5Q71RC9 77 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
PTPN9-201ENST00000306726 GPATCH11Q8N954 259 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 APPBP2Q92624 585 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 MRPL44Q9H9J2 332 aaKnown RBP16.55■□□□□ 0.24
PTPN9-201ENST00000306726 TRIM10Q9UDY6 481 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 UTYO14607 1347 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
PTPN9-201ENST00000306726 KCNQ4P56696 695 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
PTPN9-201ENST00000306726 RIN2Q8WYP3 895 aaPredicted RBP16.55■□□□□ 0.24
PTPN9-201ENST00000306726 FAN1Q9Y2M0 1017 aa16.55■□□□□ 0.24
PTPN9-201ENST00000306726 RFC4P35249 363 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 SLC35F6Q8N357 371 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 ISCA1Q9BUE6 129 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 CSRNP2Q9H175 543 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 ZSWIM5Q9P217 1185 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 SASH3O75995 380 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 LONRF2Q1L5Z9 754 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 AKR1B15C9JRZ8 316 aaPredicted RBP16.54■□□□□ 0.24
PTPN9-201ENST00000306726 ABL1P00519 1130 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN9-201ENST00000306726 MCAMP43121 646 aa16.54■□□□□ 0.24
PTPN9-201ENST00000306726 RFX5P48382 616 aaPredicted RBP16.54■□□□□ 0.24
PTPN9-201ENST00000306726 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
PTPN9-201ENST00000306726 YEATS4O95619 227 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 IPO4Q8TEX9 1081 aaKnown RBP16.53■□□□□ 0.24
PTPN9-201ENST00000306726 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 ARHGAP6O43182 974 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 ZHX3Q9H4I2 956 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 UBR3Q6ZT12 1888 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 CDC25BP30305 580 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 ARID5AQ03989 594 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
PTPN9-201ENST00000306726 ANKRD20A12PQ8NF67 263 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 LRRC4BQ9NT99 713 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 IMPACTQ9P2X3 320 aa16.53■□□□□ 0.24
PTPN9-201ENST00000306726 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 BCAMP50895 628 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 UBXN1Q04323 297 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
PTPN9-201ENST00000306726 NEDD4P46934 1319 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 CYP7A1P22680 504 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 NLRP5P59047 1200 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 RAD51AP2Q09MP3 1159 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 NCAPHQ15003 741 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
PTPN9-201ENST00000306726 USP42Q9H9J4 1324 aaKnown RBP16.52■□□□□ 0.23
PTPN9-201ENST00000306726 ATP2C2O75185 946 aa16.52■□□□□ 0.23
PTPN9-201ENST00000306726 TANGO6Q9C0B7 1094 aa16.52■□□□□ 0.23
PTPN9-201ENST00000306726 IRS4O14654 1257 aaPredicted RBP16.51■□□□□ 0.23
PTPN9-201ENST00000306726 KRT9P35527 623 aa16.51■□□□□ 0.23
PTPN9-201ENST00000306726 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
PTPN9-201ENST00000306726 VSTM4Q8IW00 320 aa16.51■□□□□ 0.23
PTPN9-201ENST00000306726 LCMT1Q9UIC8 334 aa16.51■□□□□ 0.23
PTPN9-201ENST00000306726 AFDNP55196 1824 aaKnown RBP16.51■□□□□ 0.23
PTPN9-201ENST00000306726 FOXO4P98177 505 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms