RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RARSP54136 660 aaKnown RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 SNX1Q13596 522 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 CAPS2Q9BXY5 557 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 RIC8AQ9NPQ8 531 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 ADCY8P40145 1251 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 LONRF2Q1L5Z9 754 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 MYH10P35580 1976 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 RINLQ6ZS11 566 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 CERS3Q8IU89 383 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 C17orf53Q8N3J3 647 aaPredicted RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 IFIH1Q9BYX4 1025 aaKnown RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 DBF4Q9UBU7 674 aaPredicted RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 ATF7P17544 494 aaPredicted RBP14.75□□□□□ -0.05
TRIM56-201ENST00000306085 KCNA4P22459 653 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 TEKT1Q969V4 418 aa14.75□□□□□ -0.05
TRIM56-201ENST00000306085 MCMDC2Q4G0Z9 681 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 ZNF804AQ7Z570 1209 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 ZCRB1Q8TBF4 217 aaKnown RBP14.74□□□□□ -0.05
TRIM56-201ENST00000306085 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 NAIPQ13075 1403 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 ADAMTS2O95450 1211 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 TBCCQ15814 346 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
TRIM56-201ENST00000306085 TEX11Q8IYF3 940 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 CCDC85BQ15834 202 aaPredicted RBP14.74□□□□□ -0.05
TRIM56-201ENST00000306085 LETM2Q2VYF4 491 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 ARHGAP44Q17R89 818 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 BRAPQ7Z569 592 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 KIF11P52732 1056 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 PDE4DQ08499 809 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 TMTC3Q6ZXV5 915 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 H0YC42 278 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 BCRP11274 1271 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 MYLK4Q86YV6 388 aaPredicted RBP14.74□□□□□ -0.05
TRIM56-201ENST00000306085 SCOCQ9UIL1 159 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 ANKRD50Q9ULJ7 1429 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 STAM2O75886 525 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 CD19P15391 556 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 KRT80Q6KB66 452 aa14.74□□□□□ -0.05
TRIM56-201ENST00000306085 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 PARP1P09874 1014 aaKnown RBP14.73□□□□□ -0.05
TRIM56-201ENST00000306085 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 ASPHQ12797 758 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 RAPH1Q70E73 1250 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 RPGRIP1Q96KN7 1286 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 MED10Q9BTT4 135 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 PFDN6O15212 129 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 MCUQ8NE86 351 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 HAUS1Q96CS2 278 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
TRIM56-201ENST00000306085 TRIM27P14373 513 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 RAB3GAP1Q15042 981 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 EP400NLQ6ZTU2 488 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 MAGEB6Q8N7X4 407 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 LRRC8CQ8TDW0 803 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 ST7Q9NRC1 585 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 GOLGA8QA0A0J9YX86 632 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 GOLGA8OA6NCC3 632 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 GOLGA8NF8WBI6 632 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 EVI5O60447 810 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 FBXW4P57775 412 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 MYSM1Q5VVJ2 828 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 CSGALNACT2Q8N6G5 542 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 PRPF6O94906 941 aaKnown RBP14.73□□□□□ -0.05
TRIM56-201ENST00000306085 ANGPTL3Q9Y5C1 460 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 OCM2P0CE71 109 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 OCMP0CE72 109 aaPredicted RBP14.73□□□□□ -0.05
TRIM56-201ENST00000306085 TSKSQ9UJT2 592 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 EXOC7Q9UPT5 735 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 UQCRFS1P1P0C7P4 283 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 IPO11Q9UI26 975 aaKnown RBP14.73□□□□□ -0.05
TRIM56-201ENST00000306085 SLC13A4Q9UKG4 626 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 DDX39AO00148 427 aaKnown RBP14.73□□□□□ -0.05
TRIM56-201ENST00000306085 GCNT3O95395 438 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 SFMBT2Q5VUG0 894 aa14.73□□□□□ -0.05
TRIM56-201ENST00000306085 PTPROQ16827 1216 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 UIMC1Q96RL1 719 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 MRPL44Q9H9J2 332 aaKnown RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 EEF1GP26641 437 aaKnown RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 RBM26Q5T8P6 1007 aaKnown RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 SLC4A7Q9Y6M7 1214 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 LPXNO60711 386 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 IQCB1Q15051 598 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 E2F5Q15329 346 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 MCM9Q9NXL9 1143 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 SUPT6HQ7KZ85 1726 aaKnown RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 TYW1BQ6NUM6 668 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 ANGPTL8Q6UXH0 198 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 CD2APQ9Y5K6 639 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 POLR2DO15514 142 aaKnown RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 NEUROG2Q9H2A3 272 aa14.72□□□□□ -0.05
TRIM56-201ENST00000306085 FBXO2Q9UK22 296 aaPredicted RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 ZNF277Q9NRM2 450 aaPredicted RBP14.72□□□□□ -0.05
TRIM56-201ENST00000306085 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
TRIM56-201ENST00000306085 KRIT1O00522 736 aa14.71□□□□□ -0.05
TRIM56-201ENST00000306085 NEK2P51955 445 aa14.71□□□□□ -0.05
TRIM56-201ENST00000306085 POLKQ9UBT6 870 aa14.71□□□□□ -0.05
TRIM56-201ENST00000306085 ANAPC5Q9UJX4 755 aa14.71□□□□□ -0.05
TRIM56-201ENST00000306085 SDSP20132 328 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms