RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CNNM3Q8NE01 707 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 UBAC1Q9BSL1 405 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 DCP1AQ9NPI6 582 aaPredicted RBP8.28□□□□□ -1.08
RGPD3-201ENST00000304514 CALM1P0DP23 149 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 CALM2P0DP24 149 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 CALM3P0DP25 149 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 TPM4P67936 248 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 DPYDQ12882 1025 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 DHX8Q14562 1220 aaKnown RBP8.28□□□□□ -1.08
RGPD3-201ENST00000304514 SRBD1Q8N5C6 995 aaKnown RBP8.28□□□□□ -1.08
RGPD3-201ENST00000304514 NOL10Q9BSC4 688 aaKnown RBP8.28□□□□□ -1.08
RGPD3-201ENST00000304514 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
RGPD3-201ENST00000304514 ATAD5Q96QE3 1844 aa8.27□□□□□ -1.08
RGPD3-201ENST00000304514 E2F4Q16254 413 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 IFIT1BQ5T764 474 aaKnown RBP8.27□□□□□ -1.09
RGPD3-201ENST00000304514 GRAMD1CQ8IYS0 662 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 VPS54Q9P1Q0 977 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
RGPD3-201ENST00000304514 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 MYH7BA7E2Y1 1941 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 PLCD1P51178 756 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 APTXQ7Z2E3 356 aaKnown RBP8.27□□□□□ -1.09
RGPD3-201ENST00000304514 TRIML1Q8N9V2 468 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 FAM53CQ9NYF3 392 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 ARPP21Q9UBL0 812 aaPredicted RBP8.27□□□□□ -1.09
RGPD3-201ENST00000304514 MINDY4BA8MYZ0 360 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 KCNQ4P56696 695 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 NUP133Q8WUM0 1156 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 ANKRD2Q9GZV1 360 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 FANCLQ9NW38 375 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 POLR2DO15514 142 aaKnown RBP8.27□□□□□ -1.09
RGPD3-201ENST00000304514 CBFA2T2O43439 604 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 RPS6KA4O75676 772 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
RGPD3-201ENST00000304514 C4orf32Q8N8J7 132 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 PAGE5Q96GU1 130 aa8.27□□□□□ -1.09
RGPD3-201ENST00000304514 CYP2D6P10635 497 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 CUL4BQ13620 913 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 FILIP1Q7Z7B0 1213 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 ANKS1AQ92625 1134 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 IL17RBQ9NRM6 502 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 RBBP6Q7Z6E9 1792 aaKnown RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 C10orf71Q711Q0 1435 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 CD44P16070 742 aaKnown RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 ATP2C1P98194 919 aaPredicted RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 SAFBQ15424 915 aaKnown RBP eCLIP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 L2HGDHQ9H9P8 463 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 PFKFB3Q16875 520 aaPredicted RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 RCSD1Q6JBY9 416 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 USP49Q70CQ1 688 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 CATIPQ7Z7H3 387 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 SYMPKQ92797 1274 aaKnown RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 MAD2L2Q9UI95 211 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 PBX1P40424 430 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 CT47A1Q5JQC4 288 aaPredicted RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 TRIM65Q6PJ69 517 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 OLFM4Q6UX06 510 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 C15orf52Q6ZUT6 534 aaKnown RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 TXNRD3Q86VQ6 643 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
RGPD3-201ENST00000304514 TCP11L1Q9NUJ3 509 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 ABCF2Q9UG63 623 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 KAT6BQ8WYB5 2073 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 MYH4Q9Y623 1939 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 PHLPP2Q6ZVD8 1323 aa8.26□□□□□ -1.09
RGPD3-201ENST00000304514 UBASH3AP57075 661 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 NR1I3Q14994 352 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 SH3GLB2Q9NR46 395 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 PPP1R3GB7ZBB8 358 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 HIBADHP31937 336 aaKnown RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 EPSTI1Q96J88 318 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 ATP8A2Q9NTI2 1148 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 GOLGA8FQ08AF8 430 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 GOLGA8DPQ0D2H9 430 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 SLC35G1Q2M3R5 365 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 KANK3Q6NY19 840 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 MLKLQ8NB16 471 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 SMARCE1Q969G3 411 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 TFCP2L1Q9NZI6 479 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 A0A1B0GTH6 734 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 PRDX5P30044 214 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 NUTM2BA6NNL0 878 aaPredicted RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 NUTM2EB1AL46 878 aaPredicted RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 ZRSR1Q15695 479 aaKnown RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 FAM47AQ5JRC9 791 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 CDKAL1Q5VV42 579 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 BICDL1Q6ZP65 573 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 NUTM2AQ8IVF1 878 aaPredicted RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 FNBP4Q8N3X1 1017 aaPredicted RBP8.25□□□□□ -1.09
RGPD3-201ENST00000304514 LRRN4CLQ8ND94 238 aa8.25□□□□□ -1.09
RGPD3-201ENST00000304514 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms