RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 APPBP2Q92624 585 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 MYO1AQ9UBC5 1043 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 SRGAP2O75044 1071 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 ERLIN2O94905 339 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 STIM1Q13586 685 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 TMTC1Q8IUR5 882 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
ZNF558-201ENST00000301475 GOLGA8AA7E2F4 631 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 B4E1Z4 1266 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 ZBTB43O43298 467 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 FBXW10Q5XX13 1052 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 CPLX2Q6PUV4 134 aaKnown RBP12.3□□□□□ -0.44
ZNF558-201ENST00000301475 DIS3L2Q8IYB7 885 aaKnown RBP12.3□□□□□ -0.44
ZNF558-201ENST00000301475 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 TFR2Q9UP52 801 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 TJP1Q07157 1748 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 ITIH6Q6UXX5 1313 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 ATP1A1P05023 1023 aaKnown RBP12.3□□□□□ -0.44
ZNF558-201ENST00000301475 AFMP43652 599 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 NR5A1Q13285 461 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 CHP1Q99653 195 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 GUCA1BQ9UMX6 200 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
ZNF558-201ENST00000301475 MMP1P03956 469 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 ZAP70P43403 619 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 IRAK1P51617 712 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
ZNF558-201ENST00000301475 CEP89Q96ST8 783 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 SELENOOQ9BVL4 669 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 GRIN2DO15399 1336 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 BCL9LQ86UU0 1499 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 H7C1W4 665 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
ZNF558-201ENST00000301475 GSCP56915 257 aaPredicted RBP12.29□□□□□ -0.44
ZNF558-201ENST00000301475 KRT31Q15323 416 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 CYP26C1Q6V0L0 522 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 CAPZA3Q96KX2 299 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
ZNF558-201ENST00000301475 HNRNPH1P31943 449 aaKnown RBP12.29□□□□□ -0.44
ZNF558-201ENST00000301475 CHRNA2Q15822 529 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 MAP9Q49MG5 647 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 FAM76AQ8TAV0 307 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 CTAGE1Q96RT6 745 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 SRPRBQ9Y5M8 271 aaKnown RBP12.29□□□□□ -0.44
ZNF558-201ENST00000301475 C1orf167Q5SNV9 1468 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 LMTK3Q96Q04 1460 aa12.29□□□□□ -0.44
ZNF558-201ENST00000301475 PSMD14O00487 310 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 PSEN1P49768 467 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 FILIP1LQ4L180 1135 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 KCNH5Q8NCM2 988 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 GOLGA6CA6NDK9 693 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 GOLGA6DP0CG33 693 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 MMP14P50281 582 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 KANK3Q6NY19 840 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 CADPS2Q86UW7 1296 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
ZNF558-201ENST00000301475 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
ZNF558-201ENST00000301475 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 VPS16Q9H269 839 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 GOLGA6AQ9NYA3 693 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 STK36Q9NRP7 1315 aa12.28□□□□□ -0.44
ZNF558-201ENST00000301475 PKD1L3Q7Z443 1732 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 NDUFA10O95299 355 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 KRT9P35527 623 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 PLBD2Q8NHP8 589 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 OXER1Q8TDS5 423 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 HINFPQ9BQA5 517 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 FAM107BQ9H098 131 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 STRN4Q9NRL3 753 aa12.27□□□□□ -0.44
ZNF558-201ENST00000301475 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 PDE2AO00408 941 aaPredicted RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 EBAG9O00559 213 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SEMA3EO15041 775 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 N4BP3O15049 544 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SSRP1Q08945 709 aaKnown RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 RILPL1Q5EBL4 403 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 BCAS4Q8TDM0 211 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SECISBP2LQ93073 1101 aaKnown RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 PAGE5Q96GU1 130 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms