RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 SOCS4Q8WXH5 440 aa21.59■■□□□ 1.05
BBC3-201ENST00000300880 LBHD1Q9BQE6 289 aaPredicted RBP21.59■■□□□ 1.05
BBC3-201ENST00000300880 ABCF2Q9UG63 623 aa21.59■■□□□ 1.05
BBC3-201ENST00000300880 RAPGEFL1Q9UHV5 662 aa21.59■■□□□ 1.05
BBC3-201ENST00000300880 HERVK_113P62684 666 aa21.58■■□□□ 1.05
BBC3-201ENST00000300880 MTMR2Q13614 643 aa21.58■■□□□ 1.05
BBC3-201ENST00000300880 TTC22Q5TAA0 569 aa21.58■■□□□ 1.05
BBC3-201ENST00000300880 GPRC5AQ8NFJ5 357 aa21.58■■□□□ 1.05
BBC3-201ENST00000300880 CCDC8Q9H0W5 538 aaPredicted RBP21.58■■□□□ 1.05
BBC3-201ENST00000300880 FLRT1Q9NZU1 646 aa21.58■■□□□ 1.05
BBC3-201ENST00000300880 ZBTB22O15209 634 aa21.57■■□□□ 1.04
BBC3-201ENST00000300880 HOXA7P31268 230 aaPredicted RBP21.57■■□□□ 1.04
BBC3-201ENST00000300880 IRX3P78415 501 aaPredicted RBP21.57■■□□□ 1.04
BBC3-201ENST00000300880 MECOMQ03112 1051 aa21.57■■□□□ 1.04
BBC3-201ENST00000300880 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
BBC3-201ENST00000300880 GPR142Q7Z601 462 aa21.57■■□□□ 1.04
BBC3-201ENST00000300880 TTC41PQ6P2S7 1318 aa21.57■■□□□ 1.04
BBC3-201ENST00000300880 NPM3O75607 178 aaKnown RBP21.56■■□□□ 1.04
BBC3-201ENST00000300880 COL9A1P20849 921 aa21.56■■□□□ 1.04
BBC3-201ENST00000300880 TRMT44Q8IYL2 757 aaKnown RBP21.56■■□□□ 1.04
BBC3-201ENST00000300880 TBC1D2Q9BYX2 928 aa21.56■■□□□ 1.04
BBC3-201ENST00000300880 GSPT1P15170 499 aaKnown RBP21.55■■□□□ 1.04
BBC3-201ENST00000300880 RGS2P41220 211 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 BACE1P56817 501 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 ERVK-9P63128 1117 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 ERVK-24P63145 666 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 TSHZ3Q63HK5 1081 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 ZGPATQ8N5A5 531 aaKnown RBP21.55■■□□□ 1.04
BBC3-201ENST00000300880 WDR18Q9BV38 432 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 AKAP2Q9Y2D5 859 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 FOCADQ5VW36 1801 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 MAPK4P31152 587 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 RTP1P59025 263 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 TIMM10P62072 90 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 GPATCH3Q96I76 525 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 APBA2Q99767 749 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 ECHDC1Q9NTX5 307 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 TLR7Q9NYK1 1049 aaKnown RBP21.55■■□□□ 1.04
BBC3-201ENST00000300880 NDUFB9Q9Y6M9 179 aa21.55■■□□□ 1.04
BBC3-201ENST00000300880 PLEKHH3Q7Z736 793 aa21.54■■□□□ 1.04
BBC3-201ENST00000300880 SLF2Q8IX21 1173 aa21.54■■□□□ 1.04
BBC3-201ENST00000300880 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
BBC3-201ENST00000300880 PAGR1Q9BTK6 254 aa21.54■■□□□ 1.04
BBC3-201ENST00000300880 AS3MTQ9HBK9 375 aa21.54■■□□□ 1.04
BBC3-201ENST00000300880 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
BBC3-201ENST00000300880 PDS5AQ29RF7 1337 aaKnown RBP21.53■■□□□ 1.04
BBC3-201ENST00000300880 MYO5AQ9Y4I1 1855 aaKnown RBP21.53■■□□□ 1.04
BBC3-201ENST00000300880 A0A1B0GUL7 405 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 USP38Q8NB14 1042 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 TRPV1Q8NER1 839 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 NEUROD6Q96NK8 337 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 DBNDD2Q9BQY9 259 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 DNAJC18Q9H819 358 aa21.53■■□□□ 1.04
BBC3-201ENST00000300880 ERC2O15083 957 aa21.52■■□□□ 1.03
BBC3-201ENST00000300880 CNMDO75829 334 aa21.52■■□□□ 1.03
BBC3-201ENST00000300880 BACH2Q9BYV9 841 aa21.52■■□□□ 1.03
BBC3-201ENST00000300880 TMOD4Q9NZQ9 345 aa21.52■■□□□ 1.03
BBC3-201ENST00000300880 DDX20Q9UHI6 824 aaKnown RBP21.52■■□□□ 1.03
BBC3-201ENST00000300880 GLRX3O76003 335 aaKnown RBP21.51■■□□□ 1.03
BBC3-201ENST00000300880 FOSL2P15408 326 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 MAP2K5Q13163 448 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 SPTY2D1Q68D10 685 aaPredicted RBP21.51■■□□□ 1.03
BBC3-201ENST00000300880 PI16Q6UXB8 463 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 TBC1D9Q6ZT07 1266 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 BADQ92934 168 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 NSUN4Q96CB9 384 aaKnown RBP21.51■■□□□ 1.03
BBC3-201ENST00000300880 ATP11BQ9Y2G3 1177 aa21.51■■□□□ 1.03
BBC3-201ENST00000300880 SMAD3P84022 425 aaKnown RBP21.5■■□□□ 1.03
BBC3-201ENST00000300880 LPAR1Q92633 364 aa21.5■■□□□ 1.03
BBC3-201ENST00000300880 EMILIN3Q9NT22 766 aa21.5■■□□□ 1.03
BBC3-201ENST00000300880 MYO9BQ13459 2157 aa21.49■■□□□ 1.03
BBC3-201ENST00000300880 SMCHD1A6NHR9 2005 aa21.49■■□□□ 1.03
BBC3-201ENST00000300880 SDSP20132 328 aa21.49■■□□□ 1.03
BBC3-201ENST00000300880 GJC2Q5T442 439 aaPredicted RBP21.49■■□□□ 1.03
BBC3-201ENST00000300880 SH3RF1Q7Z6J0 888 aa21.49■■□□□ 1.03
BBC3-201ENST00000300880 NPLOC4Q8TAT6 608 aa21.49■■□□□ 1.03
BBC3-201ENST00000300880 SH3RF3Q8TEJ3 882 aaPredicted RBP21.49■■□□□ 1.03
BBC3-201ENST00000300880 EDC3Q96F86 508 aaKnown RBP21.49■■□□□ 1.03
BBC3-201ENST00000300880 HERC5Q9UII4 1024 aaKnown RBP21.49■■□□□ 1.03
BBC3-201ENST00000300880 C19orf81C9J6K1 198 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 DNM1LO00429 736 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 GDF11O95390 407 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 IGHA2P01877 340 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 CYP2C19P33261 490 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 SLC39A5Q6ZMH5 540 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 SYMPKQ92797 1274 aaKnown RBP21.48■■□□□ 1.03
BBC3-201ENST00000300880 XAGE2Q96GT9 111 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 HMG20BQ9P0W2 317 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 PRKAG2Q9UGJ0 569 aa21.48■■□□□ 1.03
BBC3-201ENST00000300880 TRIM43BA6NCK2 446 aa21.47■■□□□ 1.03
BBC3-201ENST00000300880 USP17L10C9JJH3 530 aa21.47■■□□□ 1.03
BBC3-201ENST00000300880 ASNSP08243 561 aa21.47■■□□□ 1.03
BBC3-201ENST00000300880 ATP5JP18859 108 aa21.47■■□□□ 1.03
BBC3-201ENST00000300880 CNGA1P29973 690 aa21.47■■□□□ 1.03
BBC3-201ENST00000300880 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
BBC3-201ENST00000300880 TEX11Q8IYF3 940 aa21.47■■□□□ 1.03
BBC3-201ENST00000300880 TRIM43Q96BQ3 446 aaPredicted RBP21.47■■□□□ 1.03
BBC3-201ENST00000300880 PRDM5Q9NQX1 630 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms