RNA–Protein interactions for RNA: ENST00000298282.13

PKNOX2-201, Transcript of PBX/knotted 1 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX2, Length 3,687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-201ENST00000298282 SETDB2Q96T68 719 aa12.21□□□□□ -0.46
PKNOX2-201ENST00000298282 TUBE1Q9UJT0 475 aa12.21□□□□□ -0.46
PKNOX2-201ENST00000298282 FAM193AP78312 1265 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 MICU3Q86XE3 530 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 RNF26Q9BY78 433 aaPredicted RBP12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 DEXIO95424 95 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 JMYQ8N9B5 988 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 ESR2Q92731 530 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 PHKBQ93100 1093 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 MROH7-TTC4A0A0A0MT08 1334 aa12.2□□□□□ -0.46
PKNOX2-201ENST00000298282 CUTAO60888 179 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 RTN1Q16799 776 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 NFXL1Q6ZNB6 911 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 FANCBQ8NB91 859 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 ERCC4Q92889 916 aaPredicted RBP12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 ZNF202O95125 648 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 NOSTRINQ8IVI9 506 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 ZNF654Q8IZM8 581 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 TXLNBQ8N3L3 684 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 WTIPA6NIX2 430 aaPredicted RBP12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 PFKFB1P16118 471 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 RAB11FIP4Q86YS3 637 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 CREBRFQ8IUR6 639 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 ATP8A2Q9NTI2 1148 aa12.19□□□□□ -0.46
PKNOX2-201ENST00000298282 A0A1B0GVL5 298 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 ADRA2BP18089 450 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 SHC4Q6S5L8 630 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 NAT10Q9H0A0 1025 aaKnown RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 NRXN2Q9P2S2 1712 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 PPP1R13BQ96KQ4 1090 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 KCND1Q9NSA2 647 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 ADAM21Q9UKJ8 722 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 ERICH2A1L162 156 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 HIBADHP31937 336 aaKnown RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 NLRP12P59046 1061 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 TRIM29Q14134 588 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 CEP57L1Q8IYX8 460 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 ZSCAN10Q96SZ4 725 aaPredicted RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
PKNOX2-201ENST00000298282 PRPF3O43395 683 aaKnown RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 DDAH1O94760 285 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 CALM1P0DP23 149 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 CALM2P0DP24 149 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 CALM3P0DP25 149 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 RXRAP19793 462 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 LMAN1P49257 510 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 NBPF5PQ86XG9 351 aaPredicted RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 TRIM22Q8IYM9 498 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 SDR42E1Q8WUS8 393 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 TNKSO95271 1327 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 ZPR1O75312 459 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 MECOMQ03112 1051 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 SMC1AQ14683 1233 aaKnown RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 RILPL1Q5EBL4 403 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 MYL10Q9BUA6 226 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 LEMD3Q9Y2U8 911 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 IKBKBO14920 756 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 N4BP1O75113 896 aaKnown RBP12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 GUCY1A2P33402 732 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 TROAPQ12815 778 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 ANKS1AQ92625 1134 aa12.17□□□□□ -0.46
PKNOX2-201ENST00000298282 GNPATO15228 680 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 NEMFO60524 1076 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 PKN1Q16512 942 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 USP21Q9UK80 565 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 MYO1BO43795 1136 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 PTPREP23469 700 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 KLRK1P26718 216 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
PKNOX2-201ENST00000298282 PTPN21Q16825 1174 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms