RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 SSRP1Q08945 709 aaKnown RBP17.76■□□□□ 0.43
UBAP1-201ENST00000297661 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
UBAP1-201ENST00000297661 RSRC2Q7L4I2 434 aaKnown RBP17.76■□□□□ 0.43
UBAP1-201ENST00000297661 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 TMEM87BQ96K49 555 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 HPSEQ9Y251 543 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 hCG_1642624A0A1W2PR95 340 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 UQCRFS1P1P0C7P4 283 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 FGFR2P21802 821 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 PDE4BQ07343 736 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 NR5A1Q13285 461 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 LONRF2Q1L5Z9 754 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 CCDC125Q86Z20 511 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
UBAP1-201ENST00000297661 VWA3AA6NCI4 1184 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 MAP3K9P80192 1104 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 MAP3K12Q12852 859 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 NOM1Q5C9Z4 860 aaKnown RBP17.75■□□□□ 0.43
UBAP1-201ENST00000297661 TEX2Q8IWB9 1127 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 PDILTQ8N807 584 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 CNNM3Q8NE01 707 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 ZNF512BQ96KM6 892 aaPredicted RBP17.75■□□□□ 0.43
UBAP1-201ENST00000297661 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 PCDHA5Q9Y5H7 936 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 LY75O60449 1722 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 IVLP07476 585 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 SLC5A1P13866 664 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 CFAP100Q494V2 611 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 RABGGTAQ92696 567 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 WDR24Q96S15 920 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 FANCLQ9NW38 375 aa17.75■□□□□ 0.43
UBAP1-201ENST00000297661 ZSCAN12O43309 604 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 BMP6P22004 513 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 UBASH3AP57075 661 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 R3HDM1Q15032 1099 aaKnown RBP17.74■□□□□ 0.43
UBAP1-201ENST00000297661 RESP18Q5W5W9 173 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 DIS3L2Q8IYB7 885 aaKnown RBP17.74■□□□□ 0.43
UBAP1-201ENST00000297661 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
UBAP1-201ENST00000297661 GNG11P61952 73 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 SLC27A3Q5K4L6 730 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 AKNAD1Q5T1N1 836 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 DDX60Q8IY21 1712 aaKnown RBP17.74■□□□□ 0.43
UBAP1-201ENST00000297661 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 OXER1Q8TDS5 423 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 VPS18Q9P253 973 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 MRFAP1Q9Y605 127 aa17.74■□□□□ 0.43
UBAP1-201ENST00000297661 PPP6R2O75170 966 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 TTC31Q49AM3 519 aaPredicted RBP17.73■□□□□ 0.43
UBAP1-201ENST00000297661 PACS2Q86VP3 889 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 TUBE1Q9UJT0 475 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 PPP2R2CQ9Y2T4 447 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 MAP2K7O14733 419 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 PRR29P0C7W0 189 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 CCDC87Q9NVE4 849 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 LRP2BPQ9P2M1 347 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 ABCF2Q9UG63 623 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 JRKLQ9Y4A0 524 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 MROH5Q6ZUA9 1318 aa17.73■□□□□ 0.43
UBAP1-201ENST00000297661 SOCS7O14512 581 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 MAGEA9P43362 315 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 MYL5Q02045 173 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 FOXR1Q6PIV2 292 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 USP49Q70CQ1 688 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
UBAP1-201ENST00000297661 PCDHB6Q9Y5E3 794 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.72■□□□□ 0.43
UBAP1-201ENST00000297661 CCDC151A5D8V7 595 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 FAM205CA6NFA0 338 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
UBAP1-201ENST00000297661 RTN1Q16799 776 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 GOLGA1Q92805 767 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
UBAP1-201ENST00000297661 SRP68Q9UHB9 627 aaKnown RBP17.72■□□□□ 0.43
UBAP1-201ENST00000297661 POLR2DO15514 142 aaKnown RBP17.71■□□□□ 0.43
UBAP1-201ENST00000297661 GUCY2CP25092 1073 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 WTAPQ15007 396 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 BRMS1Q9HCU9 246 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 TAF1LQ8IZX4 1826 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 CYP2D7A0A087X1C5 515 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 LOC102724159A0A0B4J2E5 919 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 TXLNAP40222 546 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 PWP2Q15269 919 aaKnown RBP17.71■□□□□ 0.43
UBAP1-201ENST00000297661 JAKMIP3Q5VZ66 844 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 MSL1Q68DK7 614 aa17.71■□□□□ 0.43
UBAP1-201ENST00000297661 KRI1Q8N9T8 703 aaKnown RBP17.71■□□□□ 0.43
UBAP1-201ENST00000297661 MMP1P03956 469 aa17.71■□□□□ 0.42
UBAP1-201ENST00000297661 CHRM1P11229 460 aaPredicted RBP17.71■□□□□ 0.42
UBAP1-201ENST00000297661 LIFRP42702 1097 aa17.71■□□□□ 0.42
UBAP1-201ENST00000297661 MCM6Q14566 821 aa17.71■□□□□ 0.42
UBAP1-201ENST00000297661 OLFM4Q6UX06 510 aa17.71■□□□□ 0.42
UBAP1-201ENST00000297661 SERTAD1Q9UHV2 236 aa17.71■□□□□ 0.42
UBAP1-201ENST00000297661 MYH3P11055 1940 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms