RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 BCRP11274 1271 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 AKR1B1P15121 316 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 CAP1Q01518 475 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 CCDC129Q6ZRS4 1044 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
CDK5-201ENST00000297518 ASCC2Q9H1I8 757 aaPredicted RBP14.32□□□□□ -0.12
CDK5-201ENST00000297518 OSBPP22059 807 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 USP14P54578 494 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
CDK5-201ENST00000297518 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
CDK5-201ENST00000297518 ACER1Q8TDN7 264 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 C12orf42Q96LP6 360 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 NAPBQ9H115 298 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 EMILIN3Q9NT22 766 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
CDK5-201ENST00000297518 FOXP2O15409 715 aa14.3□□□□□ -0.12
CDK5-201ENST00000297518 SDSP20132 328 aa14.3□□□□□ -0.12
CDK5-201ENST00000297518 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
CDK5-201ENST00000297518 IRX3P78415 501 aaPredicted RBP14.3□□□□□ -0.12
CDK5-201ENST00000297518 ICA1Q05084 483 aa14.3□□□□□ -0.12
CDK5-201ENST00000297518 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
CDK5-201ENST00000297518 ARHGAP39Q9C0H5 1083 aa14.3□□□□□ -0.12
CDK5-201ENST00000297518 GREB1LQ9C091 1923 aaPredicted RBP14.3□□□□□ -0.12
CDK5-201ENST00000297518 MGAMO43451 1857 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 CCDC85CA6NKD9 419 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 GNRH1P01148 92 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 RASA1P20936 1047 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
CDK5-201ENST00000297518 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 TRIM47Q96LD4 638 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 ZNF287Q9HBT7 754 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 PTPN22Q9Y2R2 807 aa14.29□□□□□ -0.12
CDK5-201ENST00000297518 A0A1W2PRG0 241 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 HIP1O00291 1037 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 ECM2O94769 699 aaPredicted RBP14.28□□□□□ -0.12
CDK5-201ENST00000297518 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
CDK5-201ENST00000297518 VCAM1P19320 739 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 HTTP42858 3142 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 PSMC4P43686 418 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 PPARAQ07869 468 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 FAM110CQ1W6H9 321 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 TTC22Q5TAA0 569 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 VPS53Q5VIR6 699 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
CDK5-201ENST00000297518 CLEC10AQ8IUN9 316 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
CDK5-201ENST00000297518 USP17L15C9J2P7 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L11C9JVI0 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L18D6R9N7 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L22D6RA61 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L19D6RCP7 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L20D6RJB6 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 PRDM1O75626 825 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.13
CDK5-201ENST00000297518 GSPT1P15170 499 aaKnown RBP14.27□□□□□ -0.13
CDK5-201ENST00000297518 CTGFP29279 349 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 MFAP1P55081 439 aaKnown RBP14.27□□□□□ -0.13
CDK5-201ENST00000297518 FCGRTP55899 365 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 HERVK_113P62684 666 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 PDE4BQ07343 736 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 USP17L24Q0WX57 530 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 ALX1Q15699 326 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 P2RX7Q99572 595 aaKnown RBP14.27□□□□□ -0.13
CDK5-201ENST00000297518 KANSL2Q9H9L4 492 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
CDK5-201ENST00000297518 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 EEF2P13639 858 aaKnown RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 PRMT2P55345 433 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 ATP2B2Q01814 1243 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 CWC27Q6UX04 472 aaKnown RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 CENPQQ7L2Z9 268 aaPredicted RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 SIAH1Q8IUQ4 282 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 ZNF444Q8N0Y2 327 aaPredicted RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 GTF3C2Q8WUA4 911 aaPredicted RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDK5-201ENST00000297518 RPAP3Q9H6T3 665 aaPredicted RBP14.26□□□□□ -0.13
CDK5-201ENST00000297518 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 SRRDQ9UH36 339 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
CDK5-201ENST00000297518 FGAP02671 866 aa14.25□□□□□ -0.13
CDK5-201ENST00000297518 HOXD10P28358 340 aa14.25□□□□□ -0.13
CDK5-201ENST00000297518 CATSPERGQ6ZRH7 1159 aa14.25□□□□□ -0.13
CDK5-201ENST00000297518 LPAR1Q92633 364 aa14.25□□□□□ -0.13
CDK5-201ENST00000297518 VCPKMTQ9H867 229 aa14.25□□□□□ -0.13
CDK5-201ENST00000297518 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
CDK5-201ENST00000297518 PLIN4Q96Q06 1357 aa14.24□□□□□ -0.13
CDK5-201ENST00000297518 MYPNQ86TC9 1320 aa14.24□□□□□ -0.13
CDK5-201ENST00000297518 CTDSPL2Q05D32 466 aa14.24□□□□□ -0.13
CDK5-201ENST00000297518 KIAA1755Q5JYT7 1200 aa14.24□□□□□ -0.13
CDK5-201ENST00000297518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms