RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 ZMYND10O75800 440 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
CCNF-201ENST00000293968 KRT9P35527 623 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 EVA1CP58658 441 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 ZNF654Q8IZM8 581 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 FANCBQ8NB91 859 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
CCNF-201ENST00000293968 ACTN2P35609 894 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 HLFQ16534 295 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 PAGE5Q96GU1 130 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 FOXP1Q9H334 677 aaPredicted RBP16.65■□□□□ 0.26
CCNF-201ENST00000293968 UBXN1Q04323 297 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
CCNF-201ENST00000293968 RRP15Q9Y3B9 282 aaKnown RBP16.65■□□□□ 0.26
CCNF-201ENST00000293968 RIPOR2Q9Y4F9 1068 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
CCNF-201ENST00000293968 PDE8BO95263 885 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 LIFRP42702 1097 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 LCORLQ8N3X6 602 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 SDR42E1Q8WUS8 393 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
CCNF-201ENST00000293968 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 TTF2Q9UNY4 1162 aaKnown RBP16.64■□□□□ 0.25
CCNF-201ENST00000293968 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 CASP8Q14790 479 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 A0A087X0B3 334 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 MCM7P33993 719 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 KRT2P35908 639 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 BEND6Q5SZJ8 279 aaPredicted RBP16.64■□□□□ 0.25
CCNF-201ENST00000293968 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 GPIHBP1Q8IV16 184 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 NOA1Q8NC60 698 aaKnown RBP16.64■□□□□ 0.25
CCNF-201ENST00000293968 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 TRIM10Q9UDY6 481 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 TFR2Q9UP52 801 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 C5P01031 1676 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 PCDH11XQ9BZA7 1347 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 PCDH11YQ9BZA8 1340 aa16.64■□□□□ 0.25
CCNF-201ENST00000293968 CTSWP56202 376 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 PIP4K2BP78356 416 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 PLIN2Q99541 437 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 TULP2O00295 520 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 RABEP2Q9H5N1 569 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 ADD3Q9UEY8 706 aaKnown RBP16.63■□□□□ 0.25
CCNF-201ENST00000293968 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
CCNF-201ENST00000293968 GYPCP04921 128 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 SLC5A1P13866 664 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 SARSP49591 514 aaKnown RBP16.63■□□□□ 0.25
CCNF-201ENST00000293968 HDAC6Q9UBN7 1215 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 STARD3NLO95772 234 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 KRT31Q15323 416 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 TMTC1Q8IUR5 882 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 MYO6Q9UM54 1294 aa16.63■□□□□ 0.25
CCNF-201ENST00000293968 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
CCNF-201ENST00000293968 FOXR1Q6PIV2 292 aa16.62■□□□□ 0.25
CCNF-201ENST00000293968 CYP26C1Q6V0L0 522 aa16.62■□□□□ 0.25
CCNF-201ENST00000293968 SRGAP2O75044 1071 aa16.62■□□□□ 0.25
CCNF-201ENST00000293968 IPO7O95373 1038 aaKnown RBP16.62■□□□□ 0.25
CCNF-201ENST00000293968 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
CCNF-201ENST00000293968 CYP7A1P22680 504 aa16.62■□□□□ 0.25
CCNF-201ENST00000293968 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
CCNF-201ENST00000293968 NELFBQ8WX92 580 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 FAM204AQ9H8W3 233 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 GSG1L2A8MUP6 293 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 BCAMP50895 628 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
CCNF-201ENST00000293968 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 TNKSO95271 1327 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 IVLP07476 585 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 EIF5P55010 431 aaKnown RBP16.61■□□□□ 0.25
CCNF-201ENST00000293968 NLRP5P59047 1200 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 PTGDRQ13258 359 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
CCNF-201ENST00000293968 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
CCNF-201ENST00000293968 ERVK-24P63145 666 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 CCDC122Q5T0U0 273 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 IFIT1BQ5T764 474 aaKnown RBP16.6■□□□□ 0.25
CCNF-201ENST00000293968 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 DRC1Q96MC2 740 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 CHP1Q99653 195 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 SMIM22K7EJ46 135 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
CCNF-201ENST00000293968 PAK1Q13153 545 aa16.6■□□□□ 0.25
CCNF-201ENST00000293968 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms