RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 CALM2P0DP24 149 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 CALM3P0DP25 149 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 MARCKSP29966 332 aaPredicted RBP19.34■□□□□ 0.69
HIF3A-203ENST00000291300 TOB1P50616 345 aaPredicted RBP19.34■□□□□ 0.69
HIF3A-203ENST00000291300 CACNB3P54284 484 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 GNL2Q13823 731 aaKnown RBP19.34■□□□□ 0.69
HIF3A-203ENST00000291300 SLC35G1Q2M3R5 365 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 PNMA1Q8ND90 353 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 MAP3K14Q99558 947 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.34■□□□□ 0.69
HIF3A-203ENST00000291300 FAM205CA6NFA0 338 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 YDJCA8MPS7 323 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 SPTLC2O15270 562 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 PRPF3O43395 683 aaKnown RBP19.34■□□□□ 0.69
HIF3A-203ENST00000291300 KCNA3P22001 575 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 CRKP46108 304 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 PTPAQ15257 358 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 DGKHQ86XP1 1220 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 FSIP1Q8NA03 581 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 ENGASEQ8NFI3 743 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 ANKS1AQ92625 1134 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 KAT14Q9H8E8 782 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 RBM28Q9NW13 759 aaKnown RBP19.34■□□□□ 0.69
HIF3A-203ENST00000291300 A0A1B0GVL5 298 aa19.33■□□□□ 0.69
HIF3A-203ENST00000291300 LETM1O95202 739 aaPredicted RBP19.33■□□□□ 0.69
HIF3A-203ENST00000291300 YEATS4O95619 227 aa19.33■□□□□ 0.69
HIF3A-203ENST00000291300 PPP2R5BQ15173 497 aa19.33■□□□□ 0.69
HIF3A-203ENST00000291300 NOM1Q5C9Z4 860 aaKnown RBP19.33■□□□□ 0.69
HIF3A-203ENST00000291300 EARS2Q5JPH6 523 aaKnown RBP19.33■□□□□ 0.69
HIF3A-203ENST00000291300 NOSTRINQ8IVI9 506 aa19.33■□□□□ 0.69
HIF3A-203ENST00000291300 CTCFLQ8NI51 663 aaPredicted RBP19.33■□□□□ 0.69
HIF3A-203ENST00000291300 TMEM47Q9BQJ4 181 aa19.33■□□□□ 0.69
HIF3A-203ENST00000291300 TNMDQ9H2S6 317 aa19.33■□□□□ 0.69
HIF3A-203ENST00000291300 DPEP1P16444 411 aa19.33■□□□□ 0.68
HIF3A-203ENST00000291300 AXDND1Q5T1B0 1012 aaPredicted RBP19.33■□□□□ 0.68
HIF3A-203ENST00000291300 HHIPL2Q6UWX4 724 aa19.33■□□□□ 0.68
HIF3A-203ENST00000291300 TEKT1Q969V4 418 aa19.33■□□□□ 0.68
HIF3A-203ENST00000291300 TCP11L1Q9NUJ3 509 aa19.33■□□□□ 0.68
HIF3A-203ENST00000291300 DDX19AQ9NUU7 478 aaKnown RBP19.33■□□□□ 0.68
HIF3A-203ENST00000291300 STX8Q9UNK0 236 aa19.33■□□□□ 0.68
HIF3A-203ENST00000291300 KIAA2012Q0VF49 1180 aa19.32■□□□□ 0.68
HIF3A-203ENST00000291300 MAP3K11Q16584 847 aa19.32■□□□□ 0.68
HIF3A-203ENST00000291300 STRIP1Q5VSL9 837 aa19.32■□□□□ 0.68
HIF3A-203ENST00000291300 ADALQ6DHV7 355 aa19.32■□□□□ 0.68
HIF3A-203ENST00000291300 COL4A5P29400 1685 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 GABPAQ06546 454 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 SLC39A14Q15043 492 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 NPY5RQ15761 445 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 RBM43Q6ZSC3 357 aaKnown RBP19.31■□□□□ 0.68
HIF3A-203ENST00000291300 CLEC10AQ8IUN9 316 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 MAD2L2Q9UI95 211 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 NDUFA8P51970 172 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 AKAP17AQ02040 695 aaKnown RBP19.31■□□□□ 0.68
HIF3A-203ENST00000291300 NEDD1Q8NHV4 660 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 KCNG4Q8TDN1 519 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 CEP95Q96GE4 821 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 PHF20Q9BVI0 1012 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 CPVLQ9H3G5 476 aa19.31■□□□□ 0.68
HIF3A-203ENST00000291300 ERCC4Q92889 916 aaPredicted RBP19.3■□□□□ 0.68
HIF3A-203ENST00000291300 A0A087WWV3 80 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 PPIP5K2O43314 1243 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 ZBTB7AO95365 584 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 GOLGA8HP0CJ92 632 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 GRM4Q14833 912 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 FMR1NBQ8N0W7 255 aaPredicted RBP19.3■□□□□ 0.68
HIF3A-203ENST00000291300 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 OSBPL5Q9H0X9 879 aaPredicted RBP19.3■□□□□ 0.68
HIF3A-203ENST00000291300 FOXP1Q9H334 677 aaPredicted RBP19.3■□□□□ 0.68
HIF3A-203ENST00000291300 MRVI1Q9Y6F6 885 aa19.3■□□□□ 0.68
HIF3A-203ENST00000291300 WNT7AO00755 349 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 CYTH3O43739 400 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 AKR1B1P15121 316 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 FAM160A1Q05DH4 1040 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 MRPS27Q92552 414 aaKnown RBP19.29■□□□□ 0.68
HIF3A-203ENST00000291300 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 PCDHB6Q9Y5E3 794 aa19.29■□□□□ 0.68
HIF3A-203ENST00000291300 A0A1W2PQ27 194 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 A0A1W2PQ64 194 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 A0A1W2PQD8 194 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 TYRO3Q06418 890 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 TCP10Q12799 353 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 SAFBQ15424 915 aaKnown RBP eCLIP19.28■□□□□ 0.68
HIF3A-203ENST00000291300 CCDC73Q6ZRK6 1079 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 CABP5Q9NP86 173 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 ATP2B1P20020 1258 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 RBM5P52756 815 aaKnown RBP eCLIP19.28■□□□□ 0.68
HIF3A-203ENST00000291300 GRIN1Q05586 938 aa19.28■□□□□ 0.68
HIF3A-203ENST00000291300 MYH8P13535 1937 aa19.27■□□□□ 0.68
HIF3A-203ENST00000291300 FAM196BA6NMK8 535 aa19.27■□□□□ 0.68
HIF3A-203ENST00000291300 SHROOM1Q2M3G4 852 aaPredicted RBP19.27■□□□□ 0.68
HIF3A-203ENST00000291300 SHC4Q6S5L8 630 aa19.27■□□□□ 0.68
HIF3A-203ENST00000291300 GPKOWQ92917 476 aaPredicted RBP eCLIP19.27■□□□□ 0.68
HIF3A-203ENST00000291300 ZNF277Q9NRM2 450 aaPredicted RBP19.27■□□□□ 0.68
HIF3A-203ENST00000291300 CCDC192P0DO97 292 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 SCG2P13521 617 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 SHMT1P34896 483 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms