RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 HARSP12081 509 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 EVCP57679 992 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 NCAPH2Q6IBW4 605 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 CTR9Q6PD62 1173 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 KCTD1Q719H9 257 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 EYA3Q99504 573 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 LUC7LQ9NQ29 371 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 PCDHB6Q9Y5E3 794 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 SSH2Q76I76 1423 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 FAM196BA6NMK8 535 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 FOXO4P98177 505 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 NAA30Q147X3 362 aaPredicted RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 MAATS1Q7Z4T9 603 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 SLC44A5Q8NCS7 719 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 ZNF274Q96GC6 653 aaPredicted RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 FAM207AQ9NSI2 230 aaPredicted RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 PARP10Q53GL7 1025 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 RILPL1Q5EBL4 403 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 CACTINQ8WUQ7 758 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 EPSTI1Q96J88 318 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 SPAG5Q96R06 1193 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 NOC4LQ9BVI4 516 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 ANKRD2Q9GZV1 360 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 DBNDD1Q9H9R9 158 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 SENP2Q9HC62 589 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 RGPD8O14715 1765 aaPredicted RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 ARHGAP31Q2M1Z3 1444 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 ERCC6LQ2NKX8 1250 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 LRRC8AQ8IWT6 810 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 FBXO18Q8NFZ0 1043 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 RBM17Q96I25 401 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 NLRC4Q9NPP4 1024 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 VPS18Q9P253 973 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 SCAF8Q9UPN6 1271 aaKnown RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 DIP2AQ14689 1571 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 PPP1R12BO60237 982 aaPredicted RBP5.39□□□□□ -1.55
UBR1-201ENST00000290650 CUTAO60888 179 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 APBA3O96018 575 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 CCDC122Q5T0U0 273 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 KRT79Q5XKE5 535 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 USP17L2Q6R6M4 530 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 CSGALNACT2Q8N6G5 542 aa5.39□□□□□ -1.55
UBR1-201ENST00000290650 CCDC66A2RUB6 948 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 SMCO2A6NFE2 343 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TCP10L2B9ZVM9 353 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 KIF2AO00139 706 aaPredicted RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 MRPS25P82663 173 aaKnown RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 PPP2R3AQ06190 1150 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TBC1D8BQ0IIM8 1120 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 RESTQ13127 1097 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 OGFOD1Q8N543 542 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 PNMA1Q8ND90 353 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 KIFC2Q96AC6 838 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 RMND1Q9NWS8 449 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 ATP10DQ9P241 1426 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CD163L1Q9NR16 1453 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TMEM131LA2VDJ0 1609 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CALML3P27482 149 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TTC16Q8NEE8 873 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 OXER1Q8TDS5 423 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 SLC39A2Q9NP94 309 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 USP40Q9NVE5 1235 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 RBM28Q9NW13 759 aaKnown RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 PCDHA5Q9Y5H7 936 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 ANKARQ7Z5J8 1434 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 FOXN1O15353 648 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CFBP00751 764 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 PRDX5P30044 214 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CDC27P30260 824 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 PAFAH1B1P43034 410 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 BTDP43251 543 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CCDC42Q96M95 316 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TTC14Q96N46 770 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 RPAP1Q9BWH6 1393 aaPredicted RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 SIGLEC1Q9BZZ2 1709 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CLRN2A0PK11 232 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 GUCY1A2P33402 732 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TNIP1Q15025 636 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 PLCD4Q9BRC7 762 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.38□□□□□ -1.557e-7■□□□□ 8.4
UBR1-201ENST00000290650 MED23Q9ULK4 1368 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 DEPDC5O75140 1603 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 IFFO1Q0D2I5 559 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 LLGL1Q15334 1064 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CALCRLQ16602 461 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 TBC1D9BQ66K14 1250 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 SMAP1Q8IYB5 467 aaPredicted RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 SNX29Q8TEQ0 813 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 COA7Q96BR5 231 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 ARFGAP3Q9NP61 516 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 SAMSN1Q9NSI8 373 aaKnown RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 CWC15Q9P013 229 aaKnown RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 LUC7L2Q9Y383 392 aaKnown RBP5.38□□□□□ -1.55
UBR1-201ENST00000290650 ZNF804BA4D1E1 1349 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 CAVIN2O95810 425 aa5.38□□□□□ -1.55
UBR1-201ENST00000290650 MYCLP12524 364 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms