RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 LIFRP42702 1097 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 TRIM28Q13263 835 aaKnown RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 ZSCAN29Q8IWY8 852 aaPredicted RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 TGFBRAP1Q8WUH2 860 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 KRT9P35527 623 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 ASIC1P78348 528 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 TMX4Q9H1E5 349 aaPredicted RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 SEC63Q9UGP8 760 aaKnown RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 RFX7Q2KHR2 1363 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 KRT18P05783 430 aaKnown RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 USP17L8P0C7I0 530 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 RBM5P52756 815 aaKnown RBP eCLIP18■□□□□ 0.47
SMAD6-201ENST00000288840 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 CELF1Q92879 486 aaKnown RBP18■□□□□ 0.47
SMAD6-201ENST00000288840 TCP11L1Q9NUJ3 509 aa18■□□□□ 0.47
SMAD6-201ENST00000288840 CASP14P31944 242 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 RFC4P35249 363 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 NBPF11Q86T75 865 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 AGXT2Q9BYV1 514 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 DTHD1Q6ZMT9 781 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 LRRN4CLQ8ND94 238 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 LMAN1P49257 510 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 INF2Q27J81 1249 aa17.99■□□□□ 0.47
SMAD6-201ENST00000288840 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
SMAD6-201ENST00000288840 IKBKBO14920 756 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 RIMBP2O15034 1052 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 FOXP4Q8IVH2 680 aaPredicted RBP17.98■□□□□ 0.47
SMAD6-201ENST00000288840 VSTM4Q8IW00 320 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 ENAHQ8N8S7 591 aaPredicted RBP17.98■□□□□ 0.47
SMAD6-201ENST00000288840 PSMB7Q99436 277 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
SMAD6-201ENST00000288840 JADE2Q9NQC1 790 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 FAM208AQ9UK61 1670 aaKnown RBP17.98■□□□□ 0.47
SMAD6-201ENST00000288840 NFAT5O94916 1531 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 RBL2Q08999 1139 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 SLC4A9Q96Q91 983 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 XRN1Q8IZH2 1706 aaKnown RBP17.98■□□□□ 0.47
SMAD6-201ENST00000288840 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
SMAD6-201ENST00000288840 FOXP2O15409 715 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 PTPREP23469 700 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 EPS15P42566 896 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 PPARDQ03181 441 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 TPTE2Q6XPS3 522 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 CCDC66A2RUB6 948 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 CCDC96Q2M329 555 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 NELFBQ8WX92 580 aa17.97■□□□□ 0.47
SMAD6-201ENST00000288840 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
SMAD6-201ENST00000288840 OSBPL5Q9H0X9 879 aaPredicted RBP17.97■□□□□ 0.47
SMAD6-201ENST00000288840 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
SMAD6-201ENST00000288840 LTN1O94822 1766 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 ARID5AQ03989 594 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 SLC44A5Q8NCS7 719 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 ACRBPQ8NEB7 543 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 PSDA5PKW4 1024 aaPredicted RBP17.96■□□□□ 0.47
SMAD6-201ENST00000288840 SALL1Q9NSC2 1324 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 MACROD2A1Z1Q3 448 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 USP17L3A6NCW0 530 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 USP17L4A6NCW7 530 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 GOLGA6L9A6NEM1 432 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 BAG3O95817 575 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 CLCN6P51797 869 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 RAD51AP2Q09MP3 1159 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 USP17L1Q7RTZ2 530 aa17.96■□□□□ 0.47
SMAD6-201ENST00000288840 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.46
SMAD6-201ENST00000288840 CTAGE9A4FU28 777 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 TXKP42681 527 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 TDRD12Q587J7 1177 aaKnown RBP17.95■□□□□ 0.46
SMAD6-201ENST00000288840 WDR24Q96S15 920 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 GTPBP4Q9BZE4 634 aaKnown RBP17.95■□□□□ 0.46
SMAD6-201ENST00000288840 PLEKHA4Q9H4M7 779 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 MMRN2Q9H8L6 949 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 CPDO75976 1380 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 PP2D1A8MPX8 630 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 CALM1P0DP23 149 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 CALM2P0DP24 149 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 CALM3P0DP25 149 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 DYMQ7RTS9 669 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 PNMA1Q8ND90 353 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 GOLGA1Q92805 767 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 CTAGE1Q96RT6 745 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 UBA5Q9GZZ9 404 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 GDAQ9Y2T3 454 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 RGPD2P0DJD1 1756 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 ERLIN1O75477 346 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 GYS2P54840 703 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 PAK1Q13153 545 aa17.95■□□□□ 0.46
SMAD6-201ENST00000288840 ZCCHC17Q9NP64 241 aaKnown RBP17.95■□□□□ 0.46
SMAD6-201ENST00000288840 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 ENC1O14682 589 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 CCNT1O60563 726 aaKnown RBP17.94■□□□□ 0.46
SMAD6-201ENST00000288840 PLCD1P51178 756 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 MECOMQ03112 1051 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 PTPAQ15257 358 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 ADGRA1Q86SQ6 560 aa17.94■□□□□ 0.46
SMAD6-201ENST00000288840 SRRTQ9BXP5 876 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms