RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 GNAI2P04899 355 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 CNGA1P29973 690 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 ARHGAP45Q92619 1136 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 TNNQ9UQP3 1299 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
NSMCE2-201ENST00000287437 CDK5RAP2Q96SN8 1893 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 VCANP13611 3396 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 CCNA1P78396 465 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 PIH1D3Q9NQM4 214 aaKnown RBP13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 DDX20Q9UHI6 824 aaKnown RBP13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 FRMPD3Q5JV73 1810 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 FOCADQ5VW36 1801 aa13.15□□□□□ -0.3
NSMCE2-201ENST00000287437 SLC15A5A6NIM6 579 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 TRIM27P14373 513 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 PTPREP23469 700 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 CYP2C19P33261 490 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 ZAP70P43403 619 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
NSMCE2-201ENST00000287437 VCAM1P19320 739 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 CYP7A1P22680 504 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 RTP1P59025 263 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 GRB14Q14449 540 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 ZNF697Q5TEC3 545 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 CATSPERGQ6ZRH7 1159 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 LPAR1Q92633 364 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
NSMCE2-201ENST00000287437 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 DNM1LO00429 736 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 MSCO60682 206 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 HOXC6P09630 235 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 USP5P45974 858 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 USP14P54578 494 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 GJC2Q5T442 439 aaPredicted RBP13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 ATP11BQ9Y2G3 1177 aa13.12□□□□□ -0.31
NSMCE2-201ENST00000287437 IDH1O75874 414 aaKnown RBP13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 CYBAP13498 195 aa13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 CERKLQ49MI3 558 aaPredicted RBP13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 ZNF512BQ96KM6 892 aaPredicted RBP13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 EHD4Q9H223 541 aa13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 DBNLQ9UJU6 430 aaKnown RBP13.11□□□□□ -0.31
NSMCE2-201ENST00000287437 MYO5AQ9Y4I1 1855 aaKnown RBP13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 CDH23Q9H251 3354 aa13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 IPO8O15397 1037 aaKnown RBP13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 IGHA2P01877 340 aa13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 SHHQ15465 462 aa13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 MAGEB6Q8N7X4 407 aa13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 CDX2Q99626 313 aaPredicted RBP13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
NSMCE2-201ENST00000287437 IGSF3O75054 1194 aa13.09□□□□□ -0.31
NSMCE2-201ENST00000287437 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
NSMCE2-201ENST00000287437 BCAR3O75815 825 aa13.09□□□□□ -0.31
NSMCE2-201ENST00000287437 ADORA2AP29274 412 aa13.09□□□□□ -0.31
NSMCE2-201ENST00000287437 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
NSMCE2-201ENST00000287437 SHMT1P34896 483 aa13.09□□□□□ -0.31
NSMCE2-201ENST00000287437 PLCD1P51178 756 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms