RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 NR5A1Q13285 461 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 TMTC3Q6ZXV5 915 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 SPATA20Q8TB22 786 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 CABP5Q9NP86 173 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 SERTAD1Q9UHV2 236 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 PDE4BQ07343 736 aa13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 SBK1Q52WX2 424 aa13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 ISM2Q6H9L7 571 aa13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 FAM84BQ96KN1 310 aaPredicted RBP13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 TMX1Q9H3N1 280 aa13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 FANCLQ9NW38 375 aa13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
SIRPB1-202ENST00000279477 KIF5BP33176 963 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 FUT2Q10981 343 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 PKN1Q16512 942 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CTR9Q6PD62 1173 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CREBRFQ8IUR6 639 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 L2HGDHQ9H9P8 463 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 OGFRQ9NZT2 677 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 SLFN14P0C7P3 912 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 ZNF18P17022 549 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CDK11BP21127 795 aaKnown RBP13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CALML3P27482 149 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 TROAPQ12815 778 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 FOXP4Q8IVH2 680 aaPredicted RBP13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 NSUN4Q96CB9 384 aaKnown RBP13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 NFE2L3Q9Y4A8 694 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 CNTNAP5Q8WYK1 1306 aa13.01□□□□□ -0.33
SIRPB1-202ENST00000279477 NHSQ6T4R5 1651 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
SIRPB1-202ENST00000279477 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
SIRPB1-202ENST00000279477 CBX1P83916 185 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 HOMER1Q86YM7 354 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 CTAGE1Q96RT6 745 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 VPS54Q9P1Q0 977 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 NARFQ9UHQ1 456 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 TAF1P21675 1872 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 CCDC66A2RUB6 948 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 STX10O60499 249 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 ETF1P62495 437 aaKnown RBP13□□□□□ -0.33
SIRPB1-202ENST00000279477 DYNLL1P63167 89 aaKnown RBP13□□□□□ -0.33
SIRPB1-202ENST00000279477 TTC38Q5R3I4 469 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 CERS3Q8IU89 383 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 AMOTL1Q8IY63 956 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 OXER1Q8TDS5 423 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 ARID3AQ99856 593 aa13□□□□□ -0.33
SIRPB1-202ENST00000279477 TBX2Q13207 712 aaPredicted RBP12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
SIRPB1-202ENST00000279477 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 USP17L21D6R901 530 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 SCG2P13521 617 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 BMP6P22004 513 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 GNAQP50148 359 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 MECOMQ03112 1051 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 DPF2Q92785 391 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 FOXN1O15353 648 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 TXLNAP40222 546 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 GRIN1Q05586 938 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 FILIP1LQ4L180 1135 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 SPATA1Q5VX52 437 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 CELF1Q92879 486 aaKnown RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 DHX58Q96C10 678 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 NAA15Q9BXJ9 866 aaKnown RBP12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 BTAF1O14981 1849 aa12.98□□□□□ -0.33
SIRPB1-202ENST00000279477 ZPR1O75312 459 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 ATP2B1P20020 1258 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 GSTO1P78417 241 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms