RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 AKAP11Q9UKA4 1901 aa14.83□□□□□ -0.03
C9orf3-201ENST00000277198 RAD17O75943 681 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 UFL1O94874 794 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 IFNAR1P17181 557 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 HTRA3P83110 453 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 CXCL9Q07325 125 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 DOK7Q18PE1 504 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 TMTC2Q8N394 836 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 L3MBTL3Q96JM7 780 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-201ENST00000277198 OGFRQ9NZT2 677 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 SLC12A7Q9Y666 1083 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 RTL9Q8NET4 1388 aa14.83□□□□□ -0.04
C9orf3-201ENST00000277198 A0A087WWV3 80 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 USP27XA6NNY8 438 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 GOLGA8AA7E2F4 631 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 B4E1Z4 1266 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 FMNL1O95466 1100 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SLC5A1P13866 664 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 CDC27P30260 824 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 PHKA1P46020 1223 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 EIF6P56537 245 aaKnown RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 MYL5Q02045 173 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SSRP1Q08945 709 aaKnown RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 TMEM67Q5HYA8 995 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SHC4Q6S5L8 630 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 IFNL3Q8IZI9 196 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SUPT20HQ8NEM7 779 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 GTPBP4Q9BZE4 634 aaKnown RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 GJB4Q9NTQ9 266 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 ZNRF3Q9ULT6 936 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 MROH7-TTC4A0A0A0MT08 1334 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SHTN1A0MZ66 631 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SNAP23O00161 211 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SCNN1DP51172 638 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 FANCCQ00597 558 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 GPC2Q8N158 579 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 NAPBQ9H115 298 aa14.82□□□□□ -0.04
C9orf3-201ENST00000277198 TAF1DQ9H5J8 278 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 FAM217BQ9NTX9 383 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 MORC2Q9Y6X9 1032 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-201ENST00000277198 CCDC196A0A1B0GTZ2 297 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 MARCKSP29966 332 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-201ENST00000277198 SART3Q15020 963 aaKnown RBP14.81□□□□□ -0.04
C9orf3-201ENST00000277198 PPP2R5BQ15173 497 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 SAFBQ15424 915 aaKnown RBP eCLIP14.81□□□□□ -0.04
C9orf3-201ENST00000277198 E4F1Q66K89 784 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-201ENST00000277198 ARMCX5Q6P1M9 558 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 TMC6Q7Z403 805 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 ZNF592Q92610 1267 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 NACAP1Q9BZK3 213 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 L2HGDHQ9H9P8 463 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
C9orf3-201ENST00000277198 ZSCAN20P17040 1043 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 HSPA6P17066 643 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 KLRK1P26718 216 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 EPS15P42566 896 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 AKNAD1Q5T1N1 836 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 RAB11FIP4Q86YS3 637 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 NOSTRINQ8IVI9 506 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 KRI1Q8N9T8 703 aaKnown RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 STAG1Q8WVM7 1258 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 FOXP1Q9H334 677 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 BSDC1Q9NW68 430 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 PCNTO95613 3336 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 BIN1O00499 593 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 IFIT3O14879 490 aaKnown RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 RANBP6O60518 1105 aaKnown RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 SLU7O95391 586 aaKnown RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 DMTNQ08495 405 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 RILPL1Q5EBL4 403 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 KRBA2Q6ZNG9 492 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 FCHSD1Q86WN1 690 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 TRIM22Q8IYM9 498 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
C9orf3-201ENST00000277198 PHKBQ93100 1093 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 FBXW7Q969H0 707 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 AIFM3Q96NN9 605 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 HSD3B7Q9H2F3 369 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 ZSWIM5Q9P217 1185 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 GGA1Q9UJY5 639 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 KCNH3Q9ULD8 1083 aa14.8□□□□□ -0.04
C9orf3-201ENST00000277198 XDHP47989 1333 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 EPHX2P34913 555 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 CBX1P83916 185 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 CNNM3Q8NE01 707 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 ZNF397Q8NF99 534 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-201ENST00000277198 HELBQ8NG08 1087 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-201ENST00000277198 PPP1R13BQ96KQ4 1090 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 RNF41Q9H4P4 317 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms