RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 F8W031 263 aaPredicted RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 MARCKSP29966 332 aaPredicted RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 KIF5BP33176 963 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 TOB1P50616 345 aaPredicted RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 NDUFA8P51970 172 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 USP17L1Q7RTZ2 530 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 JMYQ8N9B5 988 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 PHF20Q9BVI0 1012 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
TRIM55-201ENST00000276573 TTF2Q9UNY4 1162 aaKnown RBP11.07□□□□□ -0.64
TRIM55-201ENST00000276573 NR5A1Q13285 461 aa11.06□□□□□ -0.64
TRIM55-201ENST00000276573 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
TRIM55-201ENST00000276573 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
TRIM55-201ENST00000276573 VPS54Q9P1Q0 977 aa11.06□□□□□ -0.64
TRIM55-201ENST00000276573 CNTNAP5Q8WYK1 1306 aa11.06□□□□□ -0.64
TRIM55-201ENST00000276573 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 CHRNA5P30532 468 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 ANO6Q4KMQ2 910 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 HS1BP3Q53T59 392 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 RILPL1Q5EBL4 403 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 HHIPL2Q6UWX4 724 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 FAM200AQ8TCP9 573 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
TRIM55-201ENST00000276573 RRAGDQ9NQL2 400 aaPredicted RBP11.05□□□□□ -0.64
TRIM55-201ENST00000276573 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 CUTAO60888 179 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 ZNF202O95125 648 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 KRT2P35908 639 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 GNAQP50148 359 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 GRM4Q14833 912 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 SDF4Q9BRK5 362 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 MRIQ9BWK5 157 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 KCNQ5Q9NR82 932 aa11.05□□□□□ -0.64
TRIM55-201ENST00000276573 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
TRIM55-201ENST00000276573 FAM237AA0A1B0GTK4 181 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 ESPNB1AK53 854 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 PFKFB1P16118 471 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 SCNN1DP51172 638 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 FKBP1AP62942 108 aaKnown RBP11.04□□□□□ -0.64
TRIM55-201ENST00000276573 PFKFB3Q16875 520 aaPredicted RBP11.04□□□□□ -0.64
TRIM55-201ENST00000276573 SHC4Q6S5L8 630 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 STAG2Q8N3U4 1231 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 CBX8Q9HC52 389 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
TRIM55-201ENST00000276573 CAVIN2O95810 425 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 SCG2P13521 617 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 GABPAQ06546 454 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 PICALMQ13492 652 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 NPY5RQ15761 445 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 RESP18Q5W5W9 173 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 APOBEC3HQ6NTF7 200 aaKnown RBP11.03□□□□□ -0.64
TRIM55-201ENST00000276573 CDC42EP5Q6NZY7 148 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 TEKT1Q969V4 418 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 CLIC6Q96NY7 704 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
TRIM55-201ENST00000276573 HPSEQ9Y251 543 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 MYH6P13533 1939 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
TRIM55-201ENST00000276573 ADCY5O95622 1261 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 VEGFAP15692 232 aaPredicted RBP11.03□□□□□ -0.64
TRIM55-201ENST00000276573 NOVP48745 357 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
TRIM55-201ENST00000276573 TNFRSF25Q93038 417 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 DNAJC25Q9H1X3 360 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 BRMS1Q9HCU9 246 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 STX8Q9UNK0 236 aa11.03□□□□□ -0.64
TRIM55-201ENST00000276573 MYH1P12882 1939 aa11.02□□□□□ -0.64
TRIM55-201ENST00000276573 QSER1Q2KHR3 1735 aa11.02□□□□□ -0.64
TRIM55-201ENST00000276573 DDX60LQ5H9U9 1706 aaKnown RBP11.02□□□□□ -0.64
TRIM55-201ENST00000276573 SNED1Q8TER0 1413 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 AP5Z1O43299 807 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 ECE2O60344 883 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 PTPREP23469 700 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 SYKP43405 635 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 CRKP46108 304 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 ZNF165P49910 485 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 HDLBPQ00341 1268 aaKnown RBP11.02□□□□□ -0.65
TRIM55-201ENST00000276573 STX1AQ16623 288 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 DACT2Q5SW24 774 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 LUZP1Q86V48 1076 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 ZDHHC15Q96MV8 337 aa11.02□□□□□ -0.65
TRIM55-201ENST00000276573 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms