RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 H7C1W4 665 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 PDE4BQ07343 736 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 Q6ZUG5 572 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 ARMC2Q8NEN0 867 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 ENO4A6NNW6 628 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 SMTNP53814 917 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 RNF187Q5TA31 235 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 OTUD7BQ6GQQ9 843 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 SCLT1Q96NL6 688 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 SH3GL2Q99962 352 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-201ENST00000273062 A0A1B0GUA9 196 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 SPRED3Q2MJR0 410 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 SPECC1LQ69YQ0 1117 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 DNAJC10Q8IXB1 793 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 SELENOOQ9BVL4 669 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 NBPF3Q9H094 633 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 MROH7-TTC4A0A0A0MT08 1334 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 PNOCQ13519 176 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 ACRBPQ8NEB7 543 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 SMARCC2Q8TAQ2 1214 aa17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 NCOA5Q9HCD5 579 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 SPATS2LQ9NUQ6 558 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-201ENST00000273062 TJP1Q07157 1748 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 ACCSLQ4AC99 568 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 NAA16Q6N069 864 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 LINC00301Q8NCQ3 95 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 SPDL1Q96EA4 605 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 PLCD4Q9BRC7 762 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 TMCO5BA8MYB1 307 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 USP14P54578 494 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 NBPF5PQ86XG9 351 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 SH3GL3Q99963 347 aa17.72■□□□□ 0.43
CTDSP1-201ENST00000273062 A0A1W2PQ27 194 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 A0A1W2PQ64 194 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 A0A1W2PQD8 194 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 PFKFB1P16118 471 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 LONRF3Q496Y0 759 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 CPLX3Q8WVH0 158 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 ATXN2Q99700 1313 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 CDC25CP30307 473 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 ATP1A2P50993 1020 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 KCNB1Q14721 858 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 WHAMMP3Q1A5X7 153 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 TPX2Q9ULW0 747 aaKnown RBP17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 RPS6KL1Q9Y6S9 549 aa17.71■□□□□ 0.43
CTDSP1-201ENST00000273062 OPLAHO14841 1288 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 ZEB2O60315 1214 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 AMPD2Q01433 879 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 STK38Q15208 465 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 SH2D3CQ8N5H7 860 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 ARL8AQ96BM9 186 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 BMP6P22004 513 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 SNCBQ16143 134 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 TAOK2Q9UL54 1235 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 COL15A1P39059 1388 aa17.7■□□□□ 0.42
CTDSP1-201ENST00000273062 ENC1O14682 589 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 SRGAP2O75044 1071 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 CDCA2Q69YH5 1023 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 CYB5D1Q6P9G0 228 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 PARP9Q8IXQ6 854 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 MMS19Q96T76 1030 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 PUS3Q9BZE2 481 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 RTEL1Q9NZ71 1219 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 CPSF2Q9P2I0 782 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 NAP1L1P55209 391 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 TIMM10P62072 90 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 NAA35Q5VZE5 725 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 CCDC129Q6ZRS4 1044 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 DDX46Q7L014 1031 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
CTDSP1-201ENST00000273062 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms