RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 NEFLP07196 543 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 HSPD1P10809 573 aaKnown RBP10.06□□□□□ -0.8
ERCC8-201ENST00000265038 PPARAQ07869 468 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 USP17L2Q6R6M4 530 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 PARK7Q99497 189 aaKnown RBP10.06□□□□□ -0.8
ERCC8-201ENST00000265038 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 IL25Q9H293 177 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 DIAPH3Q9NSV4 1193 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 TMOD4Q9NZQ9 345 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 TACC3Q9Y6A5 838 aa10.06□□□□□ -0.8
ERCC8-201ENST00000265038 PRDM1O75626 825 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 FGAP02671 866 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 ZYXQ15942 572 aaKnown RBP10.05□□□□□ -0.8
ERCC8-201ENST00000265038 CTU1Q7Z7A3 348 aaKnown RBP10.05□□□□□ -0.8
ERCC8-201ENST00000265038 CD99L2Q8TCZ2 262 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 C12orf42Q96LP6 360 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 KIAA1683Q9H0B3 1180 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
ERCC8-201ENST00000265038 BCRP11274 1271 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
ERCC8-201ENST00000265038 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 INCENPQ9NQS7 918 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 LAMB1P07942 1786 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 CHMLP26374 656 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 USP14P54578 494 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 ICA1Q05084 483 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 KIAA1755Q5JYT7 1200 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 ERO1AQ96HE7 468 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 FEZ1Q99689 392 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 ASCC2Q9H1I8 757 aaPredicted RBP10.04□□□□□ -0.8
ERCC8-201ENST00000265038 ANAPC4Q9UJX5 808 aa10.04□□□□□ -0.8
ERCC8-201ENST00000265038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
ERCC8-201ENST00000265038 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 IGKV6D-41A0A0C4DH26 115 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 EEF2P13639 858 aaKnown RBP10.03□□□□□ -0.8
ERCC8-201ENST00000265038 OSBPP22059 807 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 CTGFP29279 349 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
ERCC8-201ENST00000265038 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-201ENST00000265038 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
ERCC8-201ENST00000265038 OTOP1Q7RTM1 612 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 ZNF444Q8N0Y2 327 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-201ENST00000265038 P2RX7Q99572 595 aaKnown RBP10.03□□□□□ -0.8
ERCC8-201ENST00000265038 ARHGAP39Q9C0H5 1083 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 ZNF287Q9HBT7 754 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 PNMA3Q9UL41 463 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 TMX2Q9Y320 296 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 MYH1P12882 1939 aa10.03□□□□□ -0.8
ERCC8-201ENST00000265038 SLC3A2P08195 630 aaKnown RBP10.02□□□□□ -0.8
ERCC8-201ENST00000265038 FGRP09769 529 aa10.02□□□□□ -0.8
ERCC8-201ENST00000265038 VCAM1P19320 739 aa10.02□□□□□ -0.8
ERCC8-201ENST00000265038 PDE4BQ07343 736 aa10.02□□□□□ -0.8
ERCC8-201ENST00000265038 POTEEQ6S8J3 1075 aa10.02□□□□□ -0.8
ERCC8-201ENST00000265038 SMCR8Q8TEV9 937 aaPredicted RBP10.02□□□□□ -0.8
ERCC8-201ENST00000265038 TRIM17Q9Y577 477 aa10.02□□□□□ -0.8
ERCC8-201ENST00000265038 ZMYM6O95789 1325 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
ERCC8-201ENST00000265038 FAM47AQ5JRC9 791 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 CATSPERGQ6ZRH7 1159 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 NEDD1Q8NHV4 660 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 ABHD8Q96I13 439 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 DSCC1Q9BVC3 393 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 NBPF3Q9H094 633 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 EFCC1Q9HA90 598 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 ARHGEF10LQ9HCE6 1279 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 MYH7P12883 1935 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 PHIPQ8WWQ0 1821 aa10.02□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L15C9J2P7 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L13C9JLJ4 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L11C9JVI0 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L18D6R9N7 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L22D6RA61 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L17D6RBQ6 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L19D6RCP7 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L20D6RJB6 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 PEX10O60683 326 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 HAND2P61296 217 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 IRX3P78415 501 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-201ENST00000265038 TFAP4Q01664 338 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 ATP2B2Q01814 1243 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 USP17L24Q0WX57 530 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 PKN2Q16513 984 aaKnown RBP10.01□□□□□ -0.81
ERCC8-201ENST00000265038 ERICH6BQ5W0A0 696 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 RPAP3Q9H6T3 665 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-201ENST00000265038 VCPKMTQ9H867 229 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 NYAP2Q9P242 653 aa10.01□□□□□ -0.81
ERCC8-201ENST00000265038 ORC4O43929 436 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 TSPY3P0CV98 308 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 TSPY8P0CW00 308 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 PSMC4P43686 418 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 GCLCP48506 637 aaPredicted RBP10□□□□□ -0.81
ERCC8-201ENST00000265038 HERVK_113P62684 666 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 TBC1D10CQ8IV04 446 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 CEP95Q96GE4 821 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms