RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 RANBP6O60518 1105 aaKnown RBP8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 PEX10O60683 326 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 CETPP11597 493 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 MFAP1P55081 439 aaKnown RBP8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 MOGSQ13724 837 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 RASGRP2Q7LDG7 609 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 A0A0G2JLL6 359 aaPredicted RBP8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 PDHXO00330 501 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 HSPA8P11142 646 aaKnown RBP8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 TM4SF4P48230 202 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 PRRT2Q7Z6L0 340 aaPredicted RBP8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 RUFY2Q8WXA3 655 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 ESYT1Q9BSJ8 1104 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 RAD50Q92878 1312 aa8.61□□□□□ -1.03
DEPDC1B-201ENST00000265036 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 CDC45O75419 566 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 TSPY3P0CV98 308 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 TSPY8P0CW00 308 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 BACE1P56817 501 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 PDE4BQ07343 736 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 TMEM179Q6ZVK1 233 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 LRRC47Q8N1G4 583 aaKnown RBP8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZKSCAN3Q9BRR0 538 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 AS3MTQ9HBK9 375 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 DOCK3Q8IZD9 2030 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 TSPY2A6NKD2 308 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 EEF2P13639 858 aaKnown RBP8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 TFAP4Q01664 338 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 KIAA1755Q5JYT7 1200 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZNF444Q8N0Y2 327 aaPredicted RBP8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 CEP95Q96GE4 821 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 ISY1Q9ULR0 285 aaKnown RBP8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 STX8Q9UNK0 236 aa8.6□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZNF213O14771 459 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 SLC3A2P08195 630 aaKnown RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 GPAT2Q6NUI2 795 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 DSCC1Q9BVC3 393 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 CPA4Q9UI42 421 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 RBM8AQ9Y5S9 174 aaKnown RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 B4E1Z4 1266 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 CXCL11O14625 94 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 CYP21A2P08686 494 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 VCAM1P19320 739 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 CTCFP49711 727 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 ALX1Q15699 326 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 IMMTQ16891 758 aaKnown RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 SIAH1Q8IUQ4 282 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 SMCR8Q8TEV9 937 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZNF296Q8WUU4 475 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 NUP88Q99567 741 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
DEPDC1B-201ENST00000265036 ZMYM6O95789 1325 aa8.59□□□□□ -1.04
DEPDC1B-201ENST00000265036 TESPA1A2RU30 521 aaPredicted RBP8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 KDM4AO75164 1064 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 CAP1Q01518 475 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 AKNAD1Q5T1N1 836 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 OTUD7BQ6GQQ9 843 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 MFSD6Q6ZSS7 791 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 CCDC17Q96LX7 622 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 LSG1Q9H089 658 aaKnown RBP8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 CLIP2Q9UDT6 1046 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 AGTPBP1Q9UPW5 1226 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 KIAA0100Q14667 2235 aaKnown RBP8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 CA12O43570 354 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 INHBEP58166 350 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 CASC1Q6TDU7 716 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 STOX1Q6ZVD7 989 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 CHST3Q7LGC8 479 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 TICAM2Q86XR7 235 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 ZNF287Q9HBT7 754 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 ANAPC4Q9UJX5 808 aa8.58□□□□□ -1.04
DEPDC1B-201ENST00000265036 GPR25O00155 361 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 IRX3P78415 501 aaPredicted RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 FASTKD5Q7L8L6 764 aaKnown RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ANKRD23Q86SG2 305 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 STAG1Q8WVM7 1258 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 PAGR1Q9BTK6 254 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ARHGAP39Q9C0H5 1083 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ASCC2Q9H1I8 757 aaPredicted RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 RPAP3Q9H6T3 665 aaPredicted RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 KANSL2Q9H9L4 492 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 IL17RBQ9NRM6 502 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 SAGE1Q9NXZ1 904 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 BAZ2BQ9UIF8 2168 aaKnown RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 PARP14Q460N5 1801 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ALDH1A1P00352 501 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 ANKRD13CQ8N6S4 541 aa8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
DEPDC1B-201ENST00000265036 PARK7Q99497 189 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms