RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 KRT15P19012 456 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 TSC1Q92574 1164 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 NUF2Q9BZD4 464 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 MAP3K19Q56UN5 1328 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 ARHGEF35A5YM69 484 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 GPAA1O43292 621 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 MYCLP12524 364 aaPredicted RBP19.97■□□□□ 0.79
COL5A3-201ENST00000264828 CASC4Q6P4E1 433 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 TBC1D8O95759 1140 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 ARID4AP29374 1257 aaPredicted RBP19.97■□□□□ 0.79
COL5A3-201ENST00000264828 KLHL30Q0D2K2 578 aa19.97■□□□□ 0.79
COL5A3-201ENST00000264828 TTC6Q86TZ1 520 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 TBC1D31Q96DN5 1066 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 GNPATO15228 680 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 ARHGAP6O43182 974 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 GCNT3O95395 438 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 TACO1Q9BSH4 297 aaKnown RBP19.96■□□□□ 0.79
COL5A3-201ENST00000264828 I3L4J1 428 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 MYCT1Q8N699 235 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 SBNO1A3KN83 1393 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 VGLL3A8MV65 326 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 RPS6KA1Q15418 735 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 CFAP221Q4G0U5 840 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 HERC4Q5GLZ8 1057 aaPredicted RBP19.96■□□□□ 0.79
COL5A3-201ENST00000264828 SFMBT2Q5VUG0 894 aa19.96■□□□□ 0.79
COL5A3-201ENST00000264828 AATFQ9NY61 560 aaKnown RBP eCLIP19.96■□□□□ 0.79
COL5A3-201ENST00000264828 STK10O94804 968 aaKnown RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 RFC1P35251 1148 aaPredicted RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 ARHGAP25P42331 645 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 GABPAQ06546 454 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 VPS37BQ9H9H4 285 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 FAM207AQ9NSI2 230 aaPredicted RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 SATB1Q01826 763 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 USH1GQ495M9 461 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 CCDC117Q8IWD4 279 aaPredicted RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 LRMPQ12912 555 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 PDE1CQ14123 709 aaPredicted RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 PEX26Q7Z412 305 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 SLC8A3P57103 927 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 ZNF445P59923 1031 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 GABPB1Q06547 395 aaPredicted RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 PTPROQ16827 1216 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 BAIAP2L1Q9UHR4 511 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 ARHGAP44Q17R89 818 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 DENND2CQ68D51 928 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 DCUN1D2Q6PH85 259 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 RRAGAQ7L523 313 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 GBP7Q8N8V2 638 aaPredicted RBP19.95■□□□□ 0.78
COL5A3-201ENST00000264828 LRWD1Q9UFC0 647 aa19.95■□□□□ 0.78
COL5A3-201ENST00000264828 MAN1A1P33908 653 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 TRIM6Q9C030 488 aaPredicted RBP19.94■□□□□ 0.78
COL5A3-201ENST00000264828 LMBRD1Q9NUN5 540 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 KSR1Q8IVT5 923 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 XPO4Q9C0E2 1151 aaKnown RBP19.94■□□□□ 0.78
COL5A3-201ENST00000264828 PLCB1Q9NQ66 1216 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
COL5A3-201ENST00000264828 FNBP4Q8N3X1 1017 aaPredicted RBP19.94■□□□□ 0.78
COL5A3-201ENST00000264828 EXOC7Q9UPT5 735 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 GINS2Q9Y248 185 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 ZFYVE16Q7Z3T8 1539 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 LONRF2Q1L5Z9 754 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 CABP7Q86V35 215 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 EYA2O00167 538 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 KRT71Q3SY84 523 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 TRAPPC3LQ5T215 181 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 KRT40Q6A162 431 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 MRPL44Q9H9J2 332 aaKnown RBP19.94■□□□□ 0.78
COL5A3-201ENST00000264828 NLRC4Q9NPP4 1024 aa19.94■□□□□ 0.78
COL5A3-201ENST00000264828 PUM3Q15397 648 aaKnown RBP19.93■□□□□ 0.78
COL5A3-201ENST00000264828 CALCRLQ16602 461 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 TTLL3Q9Y4R7 772 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 UFL1O94874 794 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 RILPQ96NA2 401 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 POLD1P28340 1107 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 ADCY7P51828 1080 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 PLXNC1O60486 1568 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 TAF5LO75529 589 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 IFIH1Q9BYX4 1025 aaKnown RBP19.93■□□□□ 0.78
COL5A3-201ENST00000264828 SERTAD1Q9UHV2 236 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
COL5A3-201ENST00000264828 SYCE1Q8N0S2 351 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 LSM14BQ9BX40 385 aaKnown RBP19.92■□□□□ 0.78
COL5A3-201ENST00000264828 EXOC3O60645 756 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 KRT19P08727 400 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 AFAP1L2Q8N4X5 818 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 RNF10Q8N5U6 811 aaKnown RBP19.92■□□□□ 0.78
COL5A3-201ENST00000264828 DESI2Q9BSY9 194 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 PPFIA1Q13136 1202 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 MTMR3Q13615 1198 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 APPBP2Q92624 585 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
COL5A3-201ENST00000264828 SGSM2O43147 1006 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 HIBADHP31937 336 aaKnown RBP19.91■□□□□ 0.78
COL5A3-201ENST00000264828 BSPRYQ5W0U4 402 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 VPS54Q9P1Q0 977 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 DDX41Q9UJV9 622 aaKnown RBP19.91■□□□□ 0.78
COL5A3-201ENST00000264828 TBX22Q9Y458 520 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 AFG3L2Q9Y4W6 797 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 NONOQ15233 471 aaKnown RBP eCLIP19.91■□□□□ 0.78
COL5A3-201ENST00000264828 C2CD5Q86YS7 1000 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms