RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 HMGB1P09429 215 aaKnown RBP20.27■□□□□ 0.83
PDCL3-201ENST00000264254 CETPP11597 493 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 GUCY1A2P33402 732 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 VEGFBP49765 207 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 USP14P54578 494 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 FAM47AQ5JRC9 791 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 FASTKD5Q7L8L6 764 aaKnown RBP20.27■□□□□ 0.83
PDCL3-201ENST00000264254 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.83
PDCL3-201ENST00000264254 INCENPQ9NQS7 918 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 MTMR4Q9NYA4 1195 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 NYAP2Q9P242 653 aa20.27■□□□□ 0.83
PDCL3-201ENST00000264254 NEDD4P46934 1319 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 IGKV6D-41A0A0C4DH26 115 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 KDM4AO75164 1064 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 TTLL1O95922 423 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
PDCL3-201ENST00000264254 SPP2Q13103 211 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 GRM1Q13255 1194 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 SART3Q15020 963 aaKnown RBP20.26■□□□□ 0.83
PDCL3-201ENST00000264254 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 TTC14Q96N46 770 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 FEZ1Q99689 392 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 MTA3Q9BTC8 594 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDCL3-201ENST00000264254 KIAA1683Q9H0B3 1180 aa20.26■□□□□ 0.83
PDCL3-201ENST00000264254 BAZ2AQ9UIF9 1905 aaKnown RBP20.25■□□□□ 0.83
PDCL3-201ENST00000264254 TRIM75PA6NK02 468 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 B4E1Z4 1266 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 GJA5P36382 358 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 BACE1P56817 501 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 CEP95Q96GE4 821 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 UBAC1Q9BSL1 405 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 TMOD4Q9NZQ9 345 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 ZSWIM5Q9P217 1185 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 LAMB1P07942 1786 aa20.25■□□□□ 0.83
PDCL3-201ENST00000264254 A0A0G2JLL6 359 aaPredicted RBP20.24■□□□□ 0.83
PDCL3-201ENST00000264254 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
PDCL3-201ENST00000264254 EEF2P13639 858 aaKnown RBP20.24■□□□□ 0.83
PDCL3-201ENST00000264254 PSMA5P28066 241 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 MCM5P33992 734 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 ANAPC15P60006 121 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
PDCL3-201ENST00000264254 USP17L2Q6R6M4 530 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 PRRT2Q7Z6L0 340 aaPredicted RBP20.24■□□□□ 0.83
PDCL3-201ENST00000264254 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 PROCA1Q8NCQ7 364 aaPredicted RBP20.24■□□□□ 0.83
PDCL3-201ENST00000264254 MKL1Q969V6 931 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 NEK1Q96PY6 1258 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 TMX2Q9Y320 296 aa20.24■□□□□ 0.83
PDCL3-201ENST00000264254 ERICH2A1L162 156 aa20.23■□□□□ 0.83
PDCL3-201ENST00000264254 NOVP48745 357 aa20.23■□□□□ 0.83
PDCL3-201ENST00000264254 KIF23Q02241 960 aaPredicted RBP20.23■□□□□ 0.83
PDCL3-201ENST00000264254 MKRN3Q13064 507 aaKnown RBP20.23■□□□□ 0.83
PDCL3-201ENST00000264254 ZCCHC17Q9NP64 241 aaKnown RBP20.23■□□□□ 0.83
PDCL3-201ENST00000264254 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.23■□□□□ 0.83
PDCL3-201ENST00000264254 STX8Q9UNK0 236 aa20.23■□□□□ 0.83
PDCL3-201ENST00000264254 TM4SF4P48230 202 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 ATP2B2Q01814 1243 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 PABPC4Q13310 644 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDCL3-201ENST00000264254 MTMR2Q13614 643 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 STOX1Q6ZVD7 989 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 CCDC84Q86UT8 332 aaPredicted RBP20.22■□□□□ 0.83
PDCL3-201ENST00000264254 RASEFQ8IZ41 740 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 LPAR1Q92633 364 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 C12orf42Q96LP6 360 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 ZSCAN10Q96SZ4 725 aaPredicted RBP20.22■□□□□ 0.83
PDCL3-201ENST00000264254 GOPCQ9HD26 462 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 IL17RBQ9NRM6 502 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 CLIP2Q9UDT6 1046 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 SNX14Q9Y5W7 946 aa20.22■□□□□ 0.83
PDCL3-201ENST00000264254 CCL15-CCL14A0A0B4J2E2 113 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 CCL15Q16663 113 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 SIAH1Q8IUQ4 282 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
PDCL3-201ENST00000264254 ACER1Q8TDN7 264 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 ANKS1AQ92625 1134 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 TAF6LQ9Y6J9 622 aa20.21■□□□□ 0.83
PDCL3-201ENST00000264254 WDR19Q8NEZ3 1342 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 AOC2O75106 756 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 SEC24BO95487 1268 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 TOP1P11387 765 aaKnown RBP20.2■□□□□ 0.82
PDCL3-201ENST00000264254 HMGCS2P54868 508 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 MAP2K1Q02750 393 aaPredicted RBP20.2■□□□□ 0.82
PDCL3-201ENST00000264254 TMTC2Q8N394 836 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 TM6SF1Q9BZW5 370 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 VCPKMTQ9H867 229 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 SLC45A1Q9Y2W3 748 aa20.2■□□□□ 0.82
PDCL3-201ENST00000264254 DOCK1Q14185 1865 aa20.19■□□□□ 0.82
PDCL3-201ENST00000264254 A0A1W2PRG0 241 aa20.19■□□□□ 0.82
PDCL3-201ENST00000264254 DHX32Q7L7V1 743 aaKnown RBP20.19■□□□□ 0.82
PDCL3-201ENST00000264254 ANKRD23Q86SG2 305 aa20.19■□□□□ 0.82
PDCL3-201ENST00000264254 GMCL1P1Q8NEA9 526 aa20.19■□□□□ 0.82
PDCL3-201ENST00000264254 BRI3BPQ8WY22 251 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms