RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 EID1Q9Y6B2 187 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 TMCO5BA8MYB1 307 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 NDUFA10O95299 355 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 TYW1BQ6NUM6 668 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 TCP11Q8WWU5 503 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 PANX2Q96RD6 677 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 HAUS7Q99871 368 aa18.24■□□□□ 0.51
GPC1-201ENST00000264039 MCM7P33993 719 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 TTF1Q15361 905 aaPredicted RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 RSRC1Q96IZ7 334 aaKnown RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 DSCC1Q9BVC3 393 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 CHUKO15111 745 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 MARCH6O60337 910 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 NOSTRINQ8IVI9 506 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 HNRNPLLQ8WVV9 542 aaKnown RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 UBLCP1Q8WVY7 318 aaPredicted RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 RRP36Q96EU6 259 aaKnown RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 TRIM31Q9BZY9 425 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 GUCY2DQ02846 1103 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 KCTD19Q17RG1 926 aaPredicted RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 NELFBQ8WX92 580 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 TAF4BQ92750 862 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
GPC1-201ENST00000264039 DENND2AQ9ULE3 1009 aa18.23■□□□□ 0.51
GPC1-201ENST00000264039 DYDC1Q8WWB3 177 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 KNDC1Q76NI1 1749 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 KCNJ18B7U540 433 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 SPAG1Q07617 926 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 KCNJ12Q14500 433 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 SNCBQ16143 134 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 ESCO1Q5FWF5 840 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 SELENOSQ9BQE4 189 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 HAUS4Q9H6D7 363 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 CDK12Q9NYV4 1490 aaPredicted RBP18.22■□□□□ 0.51
GPC1-201ENST00000264039 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 KCNB2Q92953 911 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 VPS54Q9P1Q0 977 aa18.22■□□□□ 0.51
GPC1-201ENST00000264039 NEURL1BA8MQ27 555 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 RANBP6O60518 1105 aaKnown RBP18.21■□□□□ 0.51
GPC1-201ENST00000264039 PRDM1O75626 825 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 GLI2P10070 1586 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 ELF1P32519 619 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 APBA1Q02410 837 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
GPC1-201ENST00000264039 FAM207AQ9NSI2 230 aaPredicted RBP18.21■□□□□ 0.51
GPC1-201ENST00000264039 ZAP70P43403 619 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 PAK1Q13153 545 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
GPC1-201ENST00000264039 EZH2Q15910 746 aaKnown RBP18.21■□□□□ 0.51
GPC1-201ENST00000264039 BRD2P25440 801 aaKnown RBP18.21■□□□□ 0.51
GPC1-201ENST00000264039 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
GPC1-201ENST00000264039 KRT31Q15323 416 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 ARL8AQ96BM9 186 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 EHD2Q9NZN4 543 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 TUBE1Q9UJT0 475 aa18.21■□□□□ 0.51
GPC1-201ENST00000264039 RILPL1Q5EBL4 403 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
GPC1-201ENST00000264039 ZHX3Q9H4I2 956 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 ABHD10Q9NUJ1 306 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 ABCF2Q9UG63 623 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 NFU1Q9UMS0 254 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 IQSEC3Q9UPP2 1182 aaPredicted RBP18.2■□□□□ 0.5
GPC1-201ENST00000264039 PAX7P23759 505 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 EPS15P42566 896 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 MORC3Q14149 939 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 NAIF1Q69YI7 327 aaPredicted RBP18.2■□□□□ 0.5
GPC1-201ENST00000264039 IQUBQ8NA54 791 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 LRRC1Q9BTT6 524 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 KLC4Q9NSK0 619 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 GOLGA8KD6RF30 607 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 WTAPQ15007 396 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 RESP18Q5W5W9 173 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 HIBCHQ6NVY1 386 aaPredicted RBP18.2■□□□□ 0.5
GPC1-201ENST00000264039 MSANTD4Q8NCY6 345 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 EPB41L5Q9HCM4 733 aa18.2■□□□□ 0.5
GPC1-201ENST00000264039 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 EIF3HO15372 352 aaKnown RBP eCLIP18.19■□□□□ 0.5
GPC1-201ENST00000264039 STAT6P42226 847 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 MAP2K1Q02750 393 aaPredicted RBP18.19■□□□□ 0.5
GPC1-201ENST00000264039 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
GPC1-201ENST00000264039 THOC1Q96FV9 657 aaKnown RBP18.19■□□□□ 0.5
GPC1-201ENST00000264039 DONSONQ9NYP3 566 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 FAM184BQ9ULE4 1060 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 ANKRD18BA2A2Z9 1011 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 PPP6R2O75170 966 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 NLRP5P59047 1200 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
GPC1-201ENST00000264039 TRIM6Q9C030 488 aaPredicted RBP18.19■□□□□ 0.5
GPC1-201ENST00000264039 SLC4A4Q9Y6R1 1079 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 ZNF609O15014 1411 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 MFSD6Q6ZSS7 791 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 SYMPKQ92797 1274 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms