RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HERVK_113P62684 666 aa19.33■□□□□ 0.68
USE1-201ENST00000263897 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.68
USE1-201ENST00000263897 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.68
USE1-201ENST00000263897 ANKRD45Q5TZF3 282 aa19.33■□□□□ 0.68
USE1-201ENST00000263897 PI4K2BQ8TCG2 481 aa19.33■□□□□ 0.68
USE1-201ENST00000263897 OSBP2Q969R2 916 aa19.33■□□□□ 0.68
USE1-201ENST00000263897 SMIM22K7EJ46 135 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 MPHOSPH10O00566 681 aaKnown RBP19.32■□□□□ 0.68
USE1-201ENST00000263897 ADCY3O60266 1144 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 GLRX3O76003 335 aaKnown RBP19.32■□□□□ 0.68
USE1-201ENST00000263897 IRF5Q13568 498 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 CTR9Q6PD62 1173 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 AMOTL1Q8IY63 956 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 APPBP2Q92624 585 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 RBPJLQ9UBG7 517 aa19.32■□□□□ 0.68
USE1-201ENST00000263897 BIN2Q9UBW5 565 aaPredicted RBP19.32■□□□□ 0.68
USE1-201ENST00000263897 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
USE1-201ENST00000263897 USP17L15C9J2P7 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L13C9JLJ4 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L11C9JVI0 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L18D6R9N7 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L22D6RA61 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L17D6RBQ6 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L19D6RCP7 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L20D6RJB6 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 MX1P20591 662 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 CDK8P49336 464 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 USP17L24Q0WX57 530 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 MTFR1Q15390 333 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 LRRFIP1Q32MZ4 808 aaKnown RBP19.31■□□□□ 0.68
USE1-201ENST00000263897 TMEM179Q6ZVK1 233 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 SLAIN1Q8ND83 568 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 GPRC5AQ8NFJ5 357 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 TXNRD2Q9NNW7 524 aa19.31■□□□□ 0.68
USE1-201ENST00000263897 GSG1L2A8MUP6 293 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 GIMAP6Q6P9H5 292 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 POTEEQ6S8J3 1075 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 CATSPERGQ6ZRH7 1159 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 C16orf86Q6ZW13 317 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 PXYLP1Q8TE99 480 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 GTF3C2Q8WUA4 911 aaPredicted RBP19.3■□□□□ 0.68
USE1-201ENST00000263897 GJD2Q9UKL4 321 aa19.3■□□□□ 0.68
USE1-201ENST00000263897 SALL3Q9BXA9 1300 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 A0A1W2PRG0 241 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 PEX10O60683 326 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 AKR1B1P15121 316 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 VCAM1P19320 739 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 UBXN2AP68543 259 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 Q3C1V9 767 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 SBK1Q52WX2 424 aa19.29■□□□□ 0.68
USE1-201ENST00000263897 MYH8P13535 1937 aa19.28■□□□□ 0.68
USE1-201ENST00000263897 CCL5P13501 91 aa19.28■□□□□ 0.68
USE1-201ENST00000263897 ELNP15502 786 aa19.28■□□□□ 0.68
USE1-201ENST00000263897 SIAH1Q8IUQ4 282 aa19.28■□□□□ 0.68
USE1-201ENST00000263897 ARPP21Q9UBL0 812 aaPredicted RBP19.28■□□□□ 0.68
USE1-201ENST00000263897 CENPFP49454 3210 aa19.28■□□□□ 0.68
USE1-201ENST00000263897 GPAA1O43292 621 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 GNAT2P19087 354 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 ERVK-9P63128 1117 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 ERVK-24P63145 666 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 PAGR1Q9BTK6 254 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 RNF208Q9H0X6 261 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 RPAP3Q9H6T3 665 aaPredicted RBP19.27■□□□□ 0.68
USE1-201ENST00000263897 STAP2Q9UGK3 403 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 RABGAP1Q9Y3P9 1069 aa19.27■□□□□ 0.68
USE1-201ENST00000263897 M0R2C6 588 aa19.26■□□□□ 0.67
USE1-201ENST00000263897 GJB1P08034 283 aa19.26■□□□□ 0.67
USE1-201ENST00000263897 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
USE1-201ENST00000263897 FSD1Q9BTV5 496 aa19.26■□□□□ 0.67
USE1-201ENST00000263897 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
USE1-201ENST00000263897 TMX2Q9Y320 296 aa19.26■□□□□ 0.67
USE1-201ENST00000263897 PATL2C9JE40 543 aaKnown RBP19.25■□□□□ 0.67
USE1-201ENST00000263897 MAPK4P31152 587 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 PDE1AP54750 535 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 ZMYM1Q5SVZ6 1142 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 LBX2Q6XYB7 198 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
USE1-201ENST00000263897 UNC93B1Q9H1C4 597 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 ARHGEF10LQ9HCE6 1279 aa19.25■□□□□ 0.67
USE1-201ENST00000263897 MINDY4BA8MYZ0 360 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 CNMDO75829 334 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 APPP05067 770 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 INHAP05111 366 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 GJA8P48165 433 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 ICA1Q05084 483 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 COG2Q14746 738 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 KIAA1755Q5JYT7 1200 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 CLEC10AQ8IUN9 316 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 CCAR1Q8IX12 1150 aaKnown RBP19.24■□□□□ 0.67
USE1-201ENST00000263897 SMC5Q8IY18 1101 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 PORCNQ9H237 461 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 EPB41L4AQ9HCS5 686 aaPredicted RBP19.24■□□□□ 0.67
USE1-201ENST00000263897 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
USE1-201ENST00000263897 PRPF38BQ5VTL8 546 aaKnown RBP19.23■□□□□ 0.67
USE1-201ENST00000263897 IFNL3Q8IZI9 196 aa19.23■□□□□ 0.67
USE1-201ENST00000263897 LPAR1Q92633 364 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms