RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LSM14BQ9BX40 385 aaKnown RBP13.39□□□□□ -0.27
SMG6-201ENST00000263073 CLIC4Q9Y696 253 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 NDUFA8P51970 172 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 NAA35Q5VZE5 725 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
SMG6-201ENST00000263073 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 CRCPO75575 148 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 DMTNQ08495 405 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 TAOK1Q7L7X3 1001 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
SMG6-201ENST00000263073 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 TTC36A6NLP5 189 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
SMG6-201ENST00000263073 ZAP70P43403 619 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 RILPQ96NA2 401 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
SMG6-201ENST00000263073 ANKRD65E5RJM6 399 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
SMG6-201ENST00000263073 BAG2O95816 211 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 BSPRYQ5W0U4 402 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 GCNT3O95395 438 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 GYS2P54840 703 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 E2F5Q15329 346 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 WDR44Q5JSH3 913 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
SMG6-201ENST00000263073 MKRN1Q9UHC7 482 aaKnown RBP13.38□□□□□ -0.27
SMG6-201ENST00000263073 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 VCX3BQ9H321 246 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 TFCP2L1Q9NZI6 479 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 CABP7Q86V35 215 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 USH1CQ9Y6N9 552 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 ITIH3Q06033 890 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 GRM1Q13255 1194 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 GBP7Q8N8V2 638 aaPredicted RBP13.38□□□□□ -0.27
SMG6-201ENST00000263073 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
SMG6-201ENST00000263073 CALUO43852 315 aaPredicted RBP13.37□□□□□ -0.27
SMG6-201ENST00000263073 SH3BP5O60239 455 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 MAN1A1P33908 653 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 MTMR6Q9Y217 621 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 FANCAO15360 1455 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 RGS16O15492 202 aaPredicted RBP13.37□□□□□ -0.27
SMG6-201ENST00000263073 BIN2Q9UBW5 565 aaPredicted RBP13.37□□□□□ -0.27
SMG6-201ENST00000263073 LRWD1Q9UFC0 647 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 CETN3O15182 167 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 SORBS3O60504 671 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 STX2P32856 288 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 MYCT1Q8N699 235 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 VTI1AQ96AJ9 217 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 MORC3Q14149 939 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 FTOQ9C0B1 505 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMG6-201ENST00000263073 FAM184BQ9ULE4 1060 aa13.37□□□□□ -0.27
SMG6-201ENST00000263073 TUBB2AQ13885 445 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 VWA3BQ502W6 1294 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 TUBB2BQ9BVA1 445 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 TTC6Q86TZ1 520 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 EYA2O00167 538 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
SMG6-201ENST00000263073 CASQ2O14958 399 aaPredicted RBP13.36□□□□□ -0.27
SMG6-201ENST00000263073 PCDHB13Q9Y5F0 798 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 ARHGAP42A6NI28 874 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 KRIT1O00522 736 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 HOXC9P31274 260 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 BRD3Q15059 726 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
SMG6-201ENST00000263073 TRIM6Q9C030 488 aaPredicted RBP13.36□□□□□ -0.27
SMG6-201ENST00000263073 OPHN1O60890 802 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 E2F4Q16254 413 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 C11orf57Q6ZUT1 292 aaPredicted RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 SMYD4Q8IYR2 804 aaPredicted RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 EFCAB8A8MWE9 144 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 KIF3CO14782 793 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 STX10O60499 249 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 IFNAR2P48551 515 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 PCDHA7Q9UN72 937 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 RRP15Q9Y3B9 282 aaKnown RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 LLGL1Q15334 1064 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 APPBP2Q92624 585 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 MYCLP12524 364 aaPredicted RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 CALCRLQ16602 461 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms