RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 TCP11Q8WWU5 503 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 CAPZA3Q96KX2 299 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 SPAG5Q96R06 1193 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 CRB1P82279 1406 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 CTAGE9A4FU28 777 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 ZMYND10O75800 440 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 GCKRQ14397 625 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 MIGA1Q8NAN2 632 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 MIPOL1Q8TD10 442 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 ZNF483Q8TF39 744 aaPredicted RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 TCEANC2Q96MN5 208 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 POLD4Q9HCU8 107 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 IL16Q14005 1332 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
LDB3-201ENST00000263066 SYCP3Q8IZU3 236 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
LDB3-201ENST00000263066 PHLPP2Q6ZVD8 1323 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 SERPINB2P05120 415 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 PECAM1P16284 738 aaPredicted RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 CCZ1BP86790 482 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 TBC1D8BQ0IIM8 1120 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 ERFEQ4G0M1 354 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 LRRC24Q50LG9 513 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 C11orf57Q6ZUT1 292 aaPredicted RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 SWAP70Q9UH65 585 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 E7EVH7 732 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 UFL1O94874 794 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 CHRNA5P30532 468 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 PRPHP41219 470 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 AK2P54819 239 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 TCIRG1Q13488 830 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 PICALMQ13492 652 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 KCTD16Q68DU8 428 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 USP44Q9H0E7 712 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 ZCWPW1Q9H0M4 648 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 GREM2Q9H772 168 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 PPANQ9NQ55 473 aaKnown RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 SSH2Q76I76 1423 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 LRRD1A4D1F6 860 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 OPA1O60313 960 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 HSF2BPO75031 334 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 PDCLQ13371 301 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 TAX1BP1Q86VP1 789 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 PARP9Q8IXQ6 854 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 LMBR1Q8WVP7 490 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
LDB3-201ENST00000263066 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
LDB3-201ENST00000263066 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 PDHBP11177 359 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 CNGA1P29973 690 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 DIXDC1Q155Q3 683 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 HIBCHQ6NVY1 386 aaPredicted RBP9.37□□□□□ -0.91
LDB3-201ENST00000263066 PPP2R2CQ9Y2T4 447 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 PAX3P23760 479 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 STK38Q15208 465 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 MAATS1Q7Z4T9 603 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 IMPACTQ9P2X3 320 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 MCM8Q9UJA3 840 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 STRCQ7RTU9 1775 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 PPFIA2O75334 1257 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 CCDC175P0C221 793 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 PPFIA1Q13136 1202 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 TBC1D9BQ66K14 1250 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 SRGAP1Q7Z6B7 1085 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 TRIM42Q8IWZ5 723 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 CLIC6Q96NY7 704 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 DBNDD2Q9BQY9 259 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 ESYT1Q9BSJ8 1104 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 TSGA10Q9BZW7 698 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.91
LDB3-201ENST00000263066 ITSN1Q15811 1721 aa9.37□□□□□ -0.91
LDB3-201ENST00000263066 H0YIN7 160 aa9.36□□□□□ -0.91
LDB3-201ENST00000263066 CEP128Q6ZU80 1094 aa9.36□□□□□ -0.91
LDB3-201ENST00000263066 CPLX4Q7Z7G2 160 aa9.36□□□□□ -0.91
LDB3-201ENST00000263066 LINC00116Q8NCU8 138 aa9.36□□□□□ -0.91
LDB3-201ENST00000263066 BICD1Q96G01 975 aa9.36□□□□□ -0.91
LDB3-201ENST00000263066 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms