RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 PPP2R5DQ14738 602 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 CEP85LQ5SZL2 805 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 H0YIN7 160 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 CHL1O00533 1208 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 FYB2Q5VWT5 728 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
PHF3-201ENST00000262043 NFE2L3Q9Y4A8 694 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 CLUL1Q15846 466 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 ZNF408Q9H9D4 720 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 CIB2O75838 187 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 STK10O94804 968 aaKnown RBP11.38□□□□□ -0.59
PHF3-201ENST00000262043 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 ME3Q16798 604 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 CABP7Q86V35 215 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 CFBP00751 764 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 HOXB7P09629 217 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
PHF3-201ENST00000262043 LRWD1Q9UFC0 647 aa11.38□□□□□ -0.59
PHF3-201ENST00000262043 NR1I2O75469 434 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 NEURL1BA8MQ27 555 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 HGSO14964 777 aaPredicted RBP11.37□□□□□ -0.59
PHF3-201ENST00000262043 CTSWP56202 376 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 KRT25Q7Z3Z0 450 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 NONOQ15233 471 aaKnown RBP eCLIP11.37□□□□□ -0.59
PHF3-201ENST00000262043 FAM98CQ17RN3 349 aaKnown RBP11.37□□□□□ -0.59
PHF3-201ENST00000262043 MYO1AQ9UBC5 1043 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 NOL3O60936 208 aaKnown RBP11.37□□□□□ -0.59
PHF3-201ENST00000262043 DCUN1D2Q6PH85 259 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
PHF3-201ENST00000262043 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
PHF3-201ENST00000262043 KRT40Q6A162 431 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 TMTC1Q8IUR5 882 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 KRT19P08727 400 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 SFMBT2Q5VUG0 894 aa11.37□□□□□ -0.59
PHF3-201ENST00000262043 REXO1Q8N1G1 1221 aaKnown RBP11.37□□□□□ -0.59
PHF3-201ENST00000262043 ADKP55263 362 aaKnown RBP11.36□□□□□ -0.59
PHF3-201ENST00000262043 ZNF445P59923 1031 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 TAOK1Q7L7X3 1001 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 TPH2Q8IWU9 490 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 EPSTI1Q96J88 318 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 ABCC2Q92887 1545 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 CCDC110Q8TBZ0 833 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 CEP104O60308 925 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 TFAP4Q01664 338 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 GABPAQ06546 454 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 CASC4Q6P4E1 433 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
PHF3-201ENST00000262043 FRMPD2Q68DX3 1309 aaPredicted RBP11.36□□□□□ -0.59
PHF3-201ENST00000262043 GOLGA6BA6NDN3 693 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
PHF3-201ENST00000262043 SLF1Q9BQI6 1058 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 PFDN4Q9NQP4 134 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 CTTNBP2NLQ9P2B4 639 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 EXOC3O60645 756 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 KLHL30Q0D2K2 578 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 SYCE1Q8N0S2 351 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 LMBRD1Q9NUN5 540 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 NDUFAB1O14561 156 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 PRKG1Q13976 671 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 GKAP1Q5VSY0 366 aaPredicted RBP11.36□□□□□ -0.59
PHF3-201ENST00000262043 RDH13Q8NBN7 331 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 DSCC1Q9BVC3 393 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 PLEKHA4Q9H4M7 779 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
PHF3-201ENST00000262043 FLOT1O75955 427 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 RRAGAQ7L523 313 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 PEX26Q7Z412 305 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 FAM207AQ9NSI2 230 aaPredicted RBP11.35□□□□□ -0.59
PHF3-201ENST00000262043 ZNF131P52739 623 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 ARHGAP44Q17R89 818 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 C2CD5Q86YS7 1000 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 TTLL3Q9Y4R7 772 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 ZBED4O75132 1171 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 CCDC89Q8N998 374 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
PHF3-201ENST00000262043 IFIH1Q9BYX4 1025 aaKnown RBP11.35□□□□□ -0.59
PHF3-201ENST00000262043 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
PHF3-201ENST00000262043 PPARAQ07869 468 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 SF3A3Q12874 501 aaKnown RBP eCLIP11.35□□□□□ -0.59
PHF3-201ENST00000262043 RSRC1Q96IZ7 334 aaKnown RBP11.35□□□□□ -0.59
PHF3-201ENST00000262043 SMCO2A6NFE2 343 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 ARHGAP6O43182 974 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 AZI2Q9H6S1 392 aa11.35□□□□□ -0.59
PHF3-201ENST00000262043 TECP42680 631 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms