RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PARP3Q9Y6F1 533 aa11.38□□□□□ -0.59
PALB2-201ENST00000261584 NDUFAB1O14561 156 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 RNF40O75150 1001 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
PALB2-201ENST00000261584 CASP8Q14790 479 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 ATL3Q6DD88 541 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
PALB2-201ENST00000261584 JAKMIP2Q96AA8 810 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 MYO6Q9UM54 1294 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 CEP170BQ9Y4F5 1589 aaPredicted RBP11.37□□□□□ -0.59
PALB2-201ENST00000261584 B4DLN1 442 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 ZNF185O15231 689 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 PIP4K2BP78356 416 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 RAD9BQ6WBX8 426 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 C2CD5Q86YS7 1000 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 LCORLQ8N3X6 602 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 FAM76AQ8TAV0 307 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 CDC23Q9UJX2 597 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 TBX22Q9Y458 520 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 TNKSO95271 1327 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 ESYT3A0FGR9 886 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 HSPA2P54652 639 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 ANTXR2P58335 489 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 PAK1Q13153 545 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
PALB2-201ENST00000261584 DZIP1Q86YF9 867 aaKnown RBP11.37□□□□□ -0.59
PALB2-201ENST00000261584 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
PALB2-201ENST00000261584 BCAS4Q8TDM0 211 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 HPS3Q969F9 1004 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 SCLT1Q96NL6 688 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 KRT23Q9C075 422 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 EXOC1Q9NV70 894 aa11.37□□□□□ -0.59
PALB2-201ENST00000261584 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
PALB2-201ENST00000261584 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 MPHOSPH10O00566 681 aaKnown RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 STX10O60499 249 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 ABL1P00519 1130 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 AKNAD1Q5T1N1 836 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 FANCBQ8NB91 859 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 CEP89Q96ST8 783 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 ZMYM6O95789 1325 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 GOLGA6BA6NDN3 693 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 USP17L21D6R901 530 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 H3BQF6 201 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 KRT86O43790 486 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 USO1O60763 962 aaKnown RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
PALB2-201ENST00000261584 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 PDE4DQ08499 809 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 HLFQ16534 295 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 ARHGEF25Q86VW2 580 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 NELFCDQ8IXH7 590 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 RABGGTAQ92696 567 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 PPANQ9NQ55 473 aaKnown RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 PSMA7O14818 248 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 CYP2C19P33261 490 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 TXKP42681 527 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 GNGT1P63211 74 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 MORC3Q14149 939 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 ATG9AQ7Z3C6 839 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 SPATA5Q8NB90 893 aa11.36□□□□□ -0.59
PALB2-201ENST00000261584 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.36□□□□□ -0.59
PALB2-201ENST00000261584 VWDEQ8N2E2 1590 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 DEXIO95424 95 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 IVLP07476 585 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 ACTN2P35609 894 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 TAF4BQ92750 862 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 CTAGE1Q96RT6 745 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 PNKPQ96T60 521 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 USP8P40818 1118 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 INF2Q27J81 1249 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 SAR1BQ9Y6B6 198 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 EPN1Q9Y6I3 576 aaPredicted RBP11.35□□□□□ -0.59
PALB2-201ENST00000261584 COL15A1P39059 1388 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 HSF2BPO75031 334 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
PALB2-201ENST00000261584 CYLC1P35663 651 aaPredicted RBP11.35□□□□□ -0.59
PALB2-201ENST00000261584 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
PALB2-201ENST00000261584 PDIA6Q15084 440 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 LRRC41Q15345 812 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 CAVIN4Q5BKX8 364 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms