RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 POSTNQ15063 836 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 ZKSCAN5Q9Y2L8 839 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 SPATA31D1Q6ZQQ2 1576 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 PSMD2Q13200 908 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 MPNDQ8N594 471 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 RUBCNQ92622 972 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 FAM89AQ96GI7 184 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 RNF26Q9BY78 433 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 GPAA1O43292 621 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 RPS8P62241 208 aaKnown RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 XAGE2Q96GT9 111 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 STK17AQ9UEE5 414 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 KYAT1Q16773 422 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 H7C1D1 291 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 NOP2P46087 812 aaKnown RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 P3H4Q92791 437 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 URI1O94763 535 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 SYT1P21579 422 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 NLRP12P59046 1061 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 PAK1Q13153 545 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 SLC9C1Q4G0N8 1177 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 GTF3C6Q969F1 213 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 C8orf37Q96NL8 207 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 ALDH8A1Q9H2A2 487 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 BIN2Q9UBW5 565 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 RPLP2P05387 115 aaKnown RBP4.81□□□□□ -1.64
VPS13C-202ENST00000261517 HSPA6P17066 643 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 C8orf34Q49A92 452 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 ADALQ6DHV7 355 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 CCDC125Q86Z20 511 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 MXD3Q9BW11 206 aa4.81□□□□□ -1.64
VPS13C-202ENST00000261517 PNPLA6Q8IY17 1366 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 AK2P54819 239 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CCT2P78371 535 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 SPECC1Q5M775 1068 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TCERG1LQ5VWI1 586 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 HOMER3Q9NSC5 361 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ARHGEF35A5YM69 484 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 PFKFB2O60825 505 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 PPFIA3O75145 1194 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 SARNPP82979 210 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 RTKN2Q8IZC4 609 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 FNBP1Q96RU3 617 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 MAK16Q9BXY0 300 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 AZI2Q9H6S1 392 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 NCKAP5LQ9HCH0 1330 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 RIMBP3CA6NJZ7 1639 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 RIMBP3BA6NNM3 1639 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 RIMBP3Q9UFD9 1639 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 HDXQ7Z353 690 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ARHGAP24Q8N264 748 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 GRK7Q8WTQ7 553 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 HEG1Q9ULI3 1381 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 SKILP12757 684 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 MTX1Q13505 466 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 DPY19L2Q6NUT2 758 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 IFT20Q8IY31 132 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CSRNP1Q96S65 589 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 SYNRGQ9UMZ2 1314 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TMEM94Q12767 1356 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ZEB2O60315 1214 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 NR1I2O75469 434 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CALCOCO2Q13137 446 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 NRKQ7Z2Y5 1582 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 KDM4AO75164 1064 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 PPP6R2O75170 966 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 MBD4O95243 580 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 POLR2BP30876 1174 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TTC38Q5R3I4 469 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 FAM160B1Q5W0V3 765 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 RAB17Q9H0T7 212 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 JADE2Q9NQC1 790 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 NWD1Q149M9 1564 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ATP8B3O60423 1300 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 PRPF6O94906 941 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ERCC5P28715 1186 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 HLTFQ14527 1009 aaKnown RBP eCLIP4.8□□□□□ -1.641e-6■□□□□ 11.3
VPS13C-202ENST00000261517 CALCRLQ16602 461 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 SUPT20HL1Q3ZLR7 823 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CCDC184Q52MB2 194 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 PODNQ7Z5L7 613 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 FAM160B2Q86V87 743 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TYW1Q9NV66 732 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ADD3Q9UEY8 706 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 KCNH3Q9ULD8 1083 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 CD2APQ9Y5K6 639 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 FOXP2O15409 715 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 IRX4P78413 519 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 UBXN1Q04323 297 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ARL6IP4Q66PJ3 421 aaKnown RBP4.8□□□□□ -1.64
VPS13C-202ENST00000261517 EDEM3Q9BZQ6 932 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TBC1D7Q9P0N9 293 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 STK36Q9NRP7 1315 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ZNF233A6NK53 670 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ANXA13P27216 316 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 GNG11P61952 73 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 ANO6Q4KMQ2 910 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 TTLL7Q6ZT98 887 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 FAM83GA6ND36 823 aa4.8□□□□□ -1.64
VPS13C-202ENST00000261517 RFX1P22670 979 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms