RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 A0A087WUV0 522 aaPredicted RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 PICALMQ13492 652 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZNF827Q17R98 1081 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 LSG1Q9H089 658 aaKnown RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 FAM184BQ9ULE4 1060 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 EDC4Q6P2E9 1401 aaKnown RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 UHRF1BP1LA0JNW5 1464 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 SPOPO43791 374 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 GSDMBQ8TAX9 411 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 APPBP2Q92624 585 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 RASIP1Q5U651 963 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 HHATQ5VTY9 493 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 CMTR1Q8N1G2 835 aaKnown RBP10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 TMEM87BQ96K49 555 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 KCNQ3O43525 872 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 PFDN1O60925 122 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 NAA30Q147X3 362 aaPredicted RBP10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 CCDC110Q8TBZ0 833 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 TCP11Q8WWU5 503 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 IBTKQ9P2D0 1353 aaPredicted RBP10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ENC1O14682 589 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 GCP02774 474 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 RABGGTAQ92696 567 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ADAMTS12P58397 1594 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 LRRD1A4D1F6 860 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ASIC2Q16515 512 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ERMNQ8TAM6 284 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 IP6K1Q92551 441 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ACSBG1Q96GR2 724 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 IFIH1Q9BYX4 1025 aaKnown RBP10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 FANCLQ9NW38 375 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ZNF518AQ6AHZ1 1483 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 COG7P83436 770 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 DENND2CQ68D51 928 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 MCTP2Q6DN12 878 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 NELFBQ8WX92 580 aa10.83□□□□□ -0.68
CTDSPL2-201ENST00000260327 ASXL2Q76L83 1435 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 RGS16O15492 202 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 BAG2O95816 211 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 PNMA6AP0CW24 399 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 RAD51AP2Q09MP3 1159 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 SDCCAG8Q86SQ7 713 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 PARD6BQ9BYG5 372 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 ASIC3Q9UHC3 531 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 LOC102724159A0A0B4J2E5 919 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 GCKRQ14397 625 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 PWP2Q15269 919 aaKnown RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 ZAP70P43403 619 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 MTMR3Q13615 1198 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 C11orf57Q6ZUT1 292 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 SRGAP1Q7Z6B7 1085 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 SPATS2Q86XZ4 545 aaKnown RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 CLIC6Q96NY7 704 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 BUB1O43683 1085 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 SLC9C1Q4G0N8 1177 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 PHLDB2Q86SQ0 1253 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 FAM207AQ9NSI2 230 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 TEX11Q8IYF3 940 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 FTOQ9C0B1 505 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
CTDSPL2-201ENST00000260327 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 ITGA6P23229 1130 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 STX2P32856 288 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 EIF4A1P60842 406 aaKnown RBP10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 SCRN1Q12765 414 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 RPS6KA1Q15418 735 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 KIAA0232Q92628 1395 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 TRPM2O94759 1503 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 ADGBQ8N7X0 1667 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 SLC35F6Q8N357 371 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 SV2BQ7L1I2 683 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 DPH6Q7L8W6 267 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 RAB3IPQ96QF0 476 aaPredicted RBP10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 UIMC1Q96RL1 719 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 DPH5Q9H2P9 285 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 KRT15P19012 456 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 PLBD2Q8NHP8 589 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 EXOC4Q96A65 974 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 SUDS3Q9H7L9 328 aaPredicted RBP10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 PLCB1Q9NQ66 1216 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 VPS54Q9P1Q0 977 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 ADD1P35611 737 aaKnown RBP10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 MAP7Q14244 749 aa10.81□□□□□ -0.68
CTDSPL2-201ENST00000260327 C2CD5Q86YS7 1000 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms