RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 SENP2Q9HC62 589 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 MTMR4Q9NYA4 1195 aa18.6■□□□□ 0.57
CCDC90B-201ENST00000260054 UBE2Q2LH0YL09 131 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 NOVP48745 357 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 TOB2Q14106 344 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 VGLL4Q14135 290 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 ANP32EQ9BTT0 268 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 AGXT2Q9BYV1 514 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 SNCAIPQ9Y6H5 919 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 ATAD5Q96QE3 1844 aa18.59■□□□□ 0.57
CCDC90B-201ENST00000260054 DOCK1Q14185 1865 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 AK2P54819 239 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 FKBP1BP68106 108 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 LDLRAD1Q5T700 205 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 SIAH1Q8IUQ4 282 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 ANKRD13AQ8IZ07 590 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 FBXL16Q8N461 479 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 LY9Q9HBG7 655 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 STX8Q9UNK0 236 aa18.58■□□□□ 0.57
CCDC90B-201ENST00000260054 TRPM7Q96QT4 1865 aa18.58■□□□□ 0.56
CCDC90B-201ENST00000260054 ERICH2A1L162 156 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 CD2BP2O95400 341 aaKnown RBP18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 ICA1Q05084 483 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 WTAPQ15007 396 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 DGKHQ86XP1 1220 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 BRF1Q92994 677 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 CLMNQ96JQ2 1002 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 ALDH8A1Q9H2A2 487 aaPredicted RBP18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 GINM1Q9NU53 330 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 PTPRAP18433 802 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 FGD1P98174 961 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 FSTL1Q12841 308 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 CCDC178Q5BJE1 867 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 ANKS1AQ92625 1134 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 CSADQ9Y600 493 aa18.57■□□□□ 0.56
CCDC90B-201ENST00000260054 ST18O60284 1047 aa18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 TTLL1O95922 423 aa18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 EEF2P13639 858 aaKnown RBP18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 LIFRP42702 1097 aa18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 IFIT1BQ5T764 474 aaKnown RBP18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 CLIP2Q9UDT6 1046 aa18.56■□□□□ 0.56
CCDC90B-201ENST00000260054 A0A1W2PRG0 241 aa18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 USP17L5A8MUK1 530 aa18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 ATP2B2Q01814 1243 aa18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 SGMS1Q86VZ5 419 aa18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 TMEM47Q9BQJ4 181 aa18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 ELP3Q9H9T3 547 aa18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
CCDC90B-201ENST00000260054 ECE1P42892 770 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 APOBRQ0VD83 1088 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 ACER1Q8TDN7 264 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 BRPF3Q9ULD4 1205 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 PPP4R3BQ5MIZ7 849 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 TMTC2Q8N394 836 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 ZHX2Q9Y6X8 837 aa18.54■□□□□ 0.56
CCDC90B-201ENST00000260054 UNCXA6NJT0 531 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 TOP1P11387 765 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 EVCP57679 992 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 ANKRD1Q15327 319 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 NFXL1Q6ZNB6 911 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 MKL1Q969V6 931 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 TPCN1Q9ULQ1 816 aa18.53■□□□□ 0.56
CCDC90B-201ENST00000260054 KLF18A0A0U1RQI7 1052 aa18.52■□□□□ 0.56
CCDC90B-201ENST00000260054 CCDC69A6NI79 296 aa18.52■□□□□ 0.56
CCDC90B-201ENST00000260054 SPDYE5A6NIY4 337 aa18.52■□□□□ 0.56
CCDC90B-201ENST00000260054 PNMA1Q8ND90 353 aa18.52■□□□□ 0.56
CCDC90B-201ENST00000260054 WDR18Q9BV38 432 aa18.52■□□□□ 0.56
CCDC90B-201ENST00000260054 ARHGEF10LQ9HCE6 1279 aa18.52■□□□□ 0.56
CCDC90B-201ENST00000260054 PHIPQ8WWQ0 1821 aa18.52■□□□□ 0.55
CCDC90B-201ENST00000260054 MYH4Q9Y623 1939 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 HUNKP57058 714 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 SPP2Q13103 211 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 APOA5Q6Q788 366 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 SAPCD2Q86UD0 394 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 ERO1BQ86YB8 467 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 MYL10Q9BUA6 226 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 TMX2Q9Y320 296 aa18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 RBM19Q9Y4C8 960 aaKnown RBP18.51■□□□□ 0.55
CCDC90B-201ENST00000260054 TMEM88BA6NKF7 163 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 LARGE1O95461 756 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 PPATQ06203 517 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 RASGRP2Q7LDG7 609 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 ZNF654Q8IZM8 581 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 ZNF280CQ8ND82 737 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 SLC10A4Q96EP9 437 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms