RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ABHD8Q96I13 439 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ST7Q9NRC1 585 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 MVPQ14764 893 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 PREPLQ4J6C6 727 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 INTS8Q75QN2 995 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ATP2A3Q93084 1043 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 XAB2Q9HCS7 855 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 CHMP2BQ9UQN3 213 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 PARD3Q8TEW0 1356 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 SYCE1LA8MT33 242 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 USO1O60763 962 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 PYGLP06737 847 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ATP6V1E1P36543 226 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 RHBDL3P58872 404 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 TAF7Q15545 349 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 BRAPQ7Z569 592 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 TSPY2A6NKD2 308 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 C21orf2O43822 256 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 LCA5LO95447 670 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 TSPY3P0CV98 308 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 TSPY8P0CW00 308 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ALOX15P16050 662 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ST5P78524 1137 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 TSPY1Q01534 308 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 MAP3K21Q5TCX8 1036 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ZSCAN25Q6NSZ9 544 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 ZFATQ9P243 1243 aa7.48□□□□□ -1.21
PDGFRA-201ENST00000257290 CHGBP05060 677 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CCDC159P0C7I6 412 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 GPTP24298 496 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CPLX2Q6PUV4 134 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 RSPH3Q86UC2 560 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 UHMK1Q8TAS1 419 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 PLEKHG4BQ96PX9 1271 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 ORC3Q9UBD5 711 aaPredicted RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 SSX2IPQ9Y2D8 614 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 STK38LQ9Y2H1 464 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 MAN1A2O60476 641 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 PDE5AO76074 875 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 USP5P45974 858 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 SULT6B1Q6IMI4 303 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 NOP9Q86U38 636 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 C1orf131Q8NDD1 294 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 RIOK1Q9BRS2 568 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 AP3B1O00203 1094 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 FGFR1OPO95684 399 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 SLFN5Q08AF3 891 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CBX3Q13185 183 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 FLOT2Q14254 428 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 GSDMBQ8TAX9 411 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 SKA1Q96BD8 255 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 TRPC6Q9Y210 931 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CPLX1O14810 134 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 GUCY1B2O75343 617 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 APOBRQ0VD83 1088 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 FAPQ12884 760 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 STAMBPL1Q96FJ0 436 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CATSPER2Q96P56 530 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 SCAND2PQ9GZW5 306 aaPredicted RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 LRPPRCP42704 1394 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 YTHDC2Q9H6S0 1430 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 STAM2O75886 525 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 LDHAP00338 332 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CAPN1P07384 714 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 KRT5P13647 590 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 TATP17735 454 aaPredicted RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 IFI16Q16666 785 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 TWISTNBQ3B726 338 aaPredicted RBP7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 CCDC153Q494R4 210 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 OLFML2BQ68BL8 750 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 TTC30BQ8N4P2 665 aa7.47□□□□□ -1.21
PDGFRA-201ENST00000257290 RASSF2P50749 326 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 PLCB4Q15147 1175 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 CWF19L1Q69YN2 538 aaKnown RBP7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 P3H4Q92791 437 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 CIB2O75838 187 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 GCLCP48506 637 aaPredicted RBP7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 ANO6Q4KMQ2 910 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 FKBP15Q5T1M5 1219 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 GATAD2AQ86YP4 633 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 CKAP2LQ8IYA6 745 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 TSNARE1Q96NA8 513 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 HAUS7Q99871 368 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 PAGR1Q9BTK6 254 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 CHPF2Q9P2E5 772 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 ATPIF1Q9UII2 106 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 SH3GLB1Q9Y371 365 aa7.46□□□□□ -1.21
PDGFRA-201ENST00000257290 TTC21BQ7Z4L5 1316 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 TRIM64CA6NLI5 447 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 ZKSCAN1P17029 563 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 TUFMP49411 452 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 STAT2P52630 851 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 VAV2P52735 878 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms