RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ZNF165P49910 485 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 NEK4P51957 841 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 CASP7P55210 303 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 MICALCLQ6ZW33 695 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 LRRN4CLQ8ND94 238 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 GDPD2Q9HCC8 539 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 TRMT1Q9NXH9 659 aaKnown RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
CCNA1-201ENST00000255465 GGA2Q9UJY4 613 aa13.42□□□□□ -0.26
CCNA1-201ENST00000255465 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 LIN7AO14910 233 aaPredicted RBP13.41□□□□□ -0.26
CCNA1-201ENST00000255465 F13A1P00488 732 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 FESP07332 822 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 GSPT1P15170 499 aaKnown RBP13.41□□□□□ -0.26
CCNA1-201ENST00000255465 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 TAX1BP1Q86VP1 789 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 CARD6Q9BX69 1037 aa13.41□□□□□ -0.26
CCNA1-201ENST00000255465 API5Q9BZZ5 524 aaKnown RBP13.41□□□□□ -0.26
CCNA1-201ENST00000255465 GRM8O00222 908 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 SASH1O94885 1247 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 GORABQ5T7V8 394 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 PLEKHM2Q8IWE5 1019 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 MSANTD4Q8NCY6 345 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 TNMDQ9H2S6 317 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 BLOC1S6Q9UL45 172 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 L1RE1Q9UN81 338 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 SPEF2Q9C093 1822 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 ABCC4O15439 1325 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 KIAA0754O94854 1291 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 RSRC1Q96IZ7 334 aaKnown RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 PLEKHG4BQ96PX9 1271 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 IQCGQ9H095 443 aaKnown RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
CCNA1-201ENST00000255465 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
CCNA1-201ENST00000255465 COL4A1P02462 1669 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
CCNA1-201ENST00000255465 AP1G2O75843 785 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 CTSWP56202 376 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 IFFO1Q0D2I5 559 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
CCNA1-201ENST00000255465 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCNA1-201ENST00000255465 CEP85LQ5SZL2 805 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 HHATQ5VTY9 493 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 DTNBP1Q96EV8 351 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
CCNA1-201ENST00000255465 BICC1Q9H694 974 aaKnown RBP13.39□□□□□ -0.27
CCNA1-201ENST00000255465 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 STX6O43752 255 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 PPP2R3AQ06190 1150 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 TTLL11Q8NHH1 800 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
CCNA1-201ENST00000255465 BBOX1O75936 387 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 URI1O94763 535 aaPredicted RBP13.38□□□□□ -0.27
CCNA1-201ENST00000255465 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
CCNA1-201ENST00000255465 TMED1Q13445 227 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 GRAPQ13588 217 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 SPATA21Q7Z572 469 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 GRAPLQ8TC17 118 aaPredicted RBP13.38□□□□□ -0.27
CCNA1-201ENST00000255465 CCDC85AQ96PX6 553 aaPredicted RBP13.38□□□□□ -0.27
CCNA1-201ENST00000255465 RGL1Q9NZL6 768 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 MRFAP1Q9Y605 127 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 CAPN7Q9Y6W3 813 aa13.38□□□□□ -0.27
CCNA1-201ENST00000255465 UTYO14607 1347 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 LRRC37AA6NMS7 1700 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 EME2A4GXA9 379 aaPredicted RBP13.37□□□□□ -0.27
CCNA1-201ENST00000255465 NFKBIEO00221 500 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 RASSF7Q02833 373 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 IQCB1Q15051 598 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 ZFAND2BQ8WV99 257 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
CCNA1-201ENST00000255465 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
CCNA1-201ENST00000255465 USP44Q9H0E7 712 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 FAM204AQ9H8W3 233 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 ZNF232Q9UNY5 417 aa13.37□□□□□ -0.27
CCNA1-201ENST00000255465 RASSF9O75901 435 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms