RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 CLEC10AQ8IUN9 316 aa21.45■■□□□ 1.02
SNRPA1-201ENST00000254193 SMCR8Q8TEV9 937 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-201ENST00000254193 GSPT1P15170 499 aaKnown RBP21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 LACTBP83111 547 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 ARHGAP39Q9C0H5 1083 aa21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 KIAA1683Q9H0B3 1180 aa21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 ASCC2Q9H1I8 757 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 EFCC1Q9HA90 598 aa21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 MKNK2Q9HBH9 465 aa21.44■■□□□ 1.02
SNRPA1-201ENST00000254193 A0A1W2PRG0 241 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 PRDM1O75626 825 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 BCRP11274 1271 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 RASA1P20936 1047 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 OSBPP22059 807 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 PABPC4Q13310 644 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 PKN2Q16513 984 aaKnown RBP21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 SIAH1Q8IUQ4 282 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 DIAPH3Q9NSV4 1193 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 PNMA3Q9UL41 463 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 ROBO3Q96MS0 1386 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 MYH7P12883 1935 aa21.43■■□□□ 1.02
SNRPA1-201ENST00000254193 ICA1Q05084 483 aa21.42■■□□□ 1.02
SNRPA1-201ENST00000254193 PPARAQ07869 468 aa21.42■■□□□ 1.02
SNRPA1-201ENST00000254193 CWC27Q6UX04 472 aaKnown RBP21.42■■□□□ 1.02
SNRPA1-201ENST00000254193 PHIPQ8WWQ0 1821 aa21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 CCDC171Q6TFL3 1326 aa21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 HOXA7P31268 230 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 USP14P54578 494 aa21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 KIF22Q14807 665 aa21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 CENPQQ7L2Z9 268 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 C12orf42Q96LP6 360 aa21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 P2RX7Q99572 595 aaKnown RBP21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
SNRPA1-201ENST00000254193 HSPD1P10809 573 aaKnown RBP21.4■■□□□ 1.02
SNRPA1-201ENST00000254193 CTGFP29279 349 aa21.4■■□□□ 1.02
SNRPA1-201ENST00000254193 ALX1Q15699 326 aa21.4■■□□□ 1.02
SNRPA1-201ENST00000254193 FBXO46Q6PJ61 603 aaPredicted RBP21.4■■□□□ 1.02
SNRPA1-201ENST00000254193 ANKRD13CQ8N6S4 541 aa21.4■■□□□ 1.02
SNRPA1-201ENST00000254193 HIP1O00291 1037 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 FGAP02671 866 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 SLC3A2P08195 630 aaKnown RBP21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 VCAM1P19320 739 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 PSMC4P43686 418 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 ATP2B2Q01814 1243 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 CTDSPL2Q05D32 466 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 ARHGEF6Q15052 776 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 SKAP1Q86WV1 359 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 ZNF444Q8N0Y2 327 aaPredicted RBP21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 TRIM47Q96LD4 638 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 KANSL2Q9H9L4 492 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 ZNF287Q9HBT7 754 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 INCENPQ9NQS7 918 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 PTPN22Q9Y2R2 807 aa21.39■■□□□ 1.01
SNRPA1-201ENST00000254193 CCDC85CA6NKD9 419 aa21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 NEFLP07196 543 aa21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 EEF2P13639 858 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 GCLCP48506 637 aaPredicted RBP21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 KIAA1755Q5JYT7 1200 aa21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 ARHGEF10LQ9HCE6 1279 aa21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 TMX2Q9Y320 296 aa21.38■■□□□ 1.01
SNRPA1-201ENST00000254193 BAZ2AQ9UIF9 1905 aaKnown RBP21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 ATAD5Q96QE3 1844 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L15C9J2P7 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L13C9JLJ4 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L11C9JVI0 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L18D6R9N7 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L22D6RA61 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L17D6RBQ6 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L19D6RCP7 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L20D6RJB6 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 PEX10O60683 326 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 FMNL1O95466 1100 aaPredicted RBP21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 MFAP1P55081 439 aaKnown RBP21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 PDE4BQ07343 736 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 USP17L24Q0WX57 530 aa21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 RPAP3Q9H6T3 665 aaPredicted RBP21.37■■□□□ 1.01
SNRPA1-201ENST00000254193 HERVK_113P62684 666 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 FAM47AQ5JRC9 791 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 CATSPERGQ6ZRH7 1159 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 SPICE1Q8N0Z3 855 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 SH2D4AQ9H788 454 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 TACC3Q9Y6A5 838 aa21.36■■□□□ 1.01
SNRPA1-201ENST00000254193 CENPBP07199 599 aaPredicted RBP21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 FCGRTP55899 365 aa21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 FAM110CQ1W6H9 321 aa21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 POTEEQ6S8J3 1075 aa21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 IL25Q9H293 177 aa21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 VCPKMTQ9H867 229 aa21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 ANAPC4Q9UJX5 808 aa21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.35■■□□□ 1.01
SNRPA1-201ENST00000254193 IGKV6D-41A0A0C4DH26 115 aa21.34■■□□□ 1.01
SNRPA1-201ENST00000254193 HAND2P61296 217 aa21.34■■□□□ 1.01
SNRPA1-201ENST00000254193 TFAP4Q01664 338 aa21.34■■□□□ 1.01
SNRPA1-201ENST00000254193 TXNRD2Q9NNW7 524 aa21.34■■□□□ 1.01
SNRPA1-201ENST00000254193 RBPJLQ9UBG7 517 aa21.34■■□□□ 1.01
SNRPA1-201ENST00000254193 PTCH2Q9Y6C5 1203 aa21.34■■□□□ 1.01
SNRPA1-201ENST00000254193 PTPRFP10586 1907 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms