RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 BCCIPQ9P287 314 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 USO1O60763 962 aaKnown RBP17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 CYLC1P35663 651 aaPredicted RBP17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 NLRP5P59047 1200 aa17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 SAR1BQ9Y6B6 198 aa17.91■□□□□ 0.46
SLC6A8-201ENST00000253122 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 TOM1O60784 492 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 HSF2BPO75031 334 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 KIF5AQ12840 1032 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 SPATA1Q5VX52 437 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 A1BGP04217 495 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 AKR1B10O60218 316 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 MRPS25P82663 173 aaKnown RBP17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 PLBD2Q8NHP8 589 aa17.9■□□□□ 0.46
SLC6A8-201ENST00000253122 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.46
SLC6A8-201ENST00000253122 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.46
SLC6A8-201ENST00000253122 RESP18Q5W5W9 173 aa17.89■□□□□ 0.46
SLC6A8-201ENST00000253122 CSRNP2Q9H175 543 aa17.89■□□□□ 0.46
SLC6A8-201ENST00000253122 INCENPQ9NQS7 918 aa17.89■□□□□ 0.46
SLC6A8-201ENST00000253122 IQSEC3Q9UPP2 1182 aaPredicted RBP17.89■□□□□ 0.46
SLC6A8-201ENST00000253122 ADAMTS2O95450 1211 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 HLTFQ14527 1009 aaKnown RBP eCLIP17.89■□□□□ 0.454e-11■■□□□ 12
SLC6A8-201ENST00000253122 MAATS1Q7Z4T9 603 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 EHBP1Q8NDI1 1231 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 PNKPQ96T60 521 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 CARD10Q9BWT7 1032 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 PHRF1Q9P1Y6 1649 aaKnown RBP17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 KRT83P78385 493 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 CCDC91Q7Z6B0 441 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 IFT81Q8WYA0 676 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 RIN2Q8WYP3 895 aaPredicted RBP17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
SLC6A8-201ENST00000253122 TDRD12Q587J7 1177 aaKnown RBP17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 FOXR1Q6PIV2 292 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 GSPT2Q8IYD1 628 aaKnown RBP17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 MIGA1Q8NAN2 632 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 TMEM87BQ96K49 555 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 EPN1Q9Y6I3 576 aaPredicted RBP17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 RGPD2P0DJD1 1756 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 SRGAP2O75044 1071 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 CDC25AP30304 524 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 MCM7P33993 719 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 GNGT1P63211 74 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 RAD9BQ6WBX8 426 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 VPS54Q9P1Q0 977 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 PCDHB6Q9Y5E3 794 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 TTF1Q15361 905 aaPredicted RBP17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 CCDC42Q96M95 316 aa17.88■□□□□ 0.45
SLC6A8-201ENST00000253122 OPA1O60313 960 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 ATP1A2P50993 1020 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 ANKRD18AQ8IVF6 992 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 IQUBQ8NA54 791 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 JAKMIP2Q96AA8 810 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 CYP27B1O15528 508 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 MBD4O95243 580 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 CDC27P30260 824 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 CEP57Q86XR8 500 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 MAGEB6Q8N7X4 407 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 SLC4A4Q9Y6R1 1079 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 STAT6P42226 847 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 EPSTI1Q96J88 318 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 PANX2Q96RD6 677 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 MEGF6O75095 1541 aa17.87■□□□□ 0.45
SLC6A8-201ENST00000253122 TULP2O00295 520 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 PPFIA4O75335 1185 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 SSBP05455 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 UBA7P41226 1012 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 HDAC6Q9UBN7 1215 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 PAK1Q13153 545 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 CT47A1Q5JQC4 288 aaPredicted RBP17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 NOA1Q8NC60 698 aaKnown RBP17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 MYCBPQ99417 103 aaPredicted RBP17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 KRT23Q9C075 422 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 ZNF532Q9HCE3 1301 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 ERCC3P19447 782 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 BEND6Q5SZJ8 279 aaPredicted RBP17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 CATIPQ7Z7H3 387 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 CAPN7Q9Y6W3 813 aa17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
SLC6A8-201ENST00000253122 OVOS2A0A0G2JMS6 1433 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 RNASE9P60153 205 aaKnown RBP17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 SLC4A8Q2Y0W8 1093 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 CACNA2D4Q7Z3S7 1137 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 MFAP3LO75121 409 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 TACC1O75410 805 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 DEXIO95424 95 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 ERCC5P28715 1186 aaPredicted RBP17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 TRIML1Q8N9V2 468 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 OR8K1Q8NGG5 319 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 NELFBQ8WX92 580 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 LOC102724159A0A0B4J2E5 919 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 PWP2Q15269 919 aaKnown RBP17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 KCTD16Q68DU8 428 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms