RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TFAP4Q01664 338 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 CNNM3Q8NE01 707 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 TGFBRAP1Q8WUH2 860 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 CACTINQ8WUQ7 758 aaKnown RBP24.9■■□□□ 1.58
CLN6-201ENST00000249806 CNTNAP5Q8WYK1 1306 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 FOXN1O15353 648 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 TPM2P07951 284 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 KRT2P35908 639 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 TERF1P54274 439 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 C15orf52Q6ZUT6 534 aaKnown RBP24.9■■□□□ 1.58
CLN6-201ENST00000249806 IL17RBQ9NRM6 502 aa24.9■■□□□ 1.58
CLN6-201ENST00000249806 VEGFAP15692 232 aaPredicted RBP24.89■■□□□ 1.58
CLN6-201ENST00000249806 NOM1Q5C9Z4 860 aaKnown RBP24.89■■□□□ 1.58
CLN6-201ENST00000249806 RBM17Q96I25 401 aaKnown RBP24.89■■□□□ 1.58
CLN6-201ENST00000249806 BAG3O95817 575 aa24.89■■□□□ 1.57
CLN6-201ENST00000249806 DDR1Q08345 913 aa24.89■■□□□ 1.57
CLN6-201ENST00000249806 GSTO1P78417 241 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 ARID5BQ14865 1188 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 NCAPHQ15003 741 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 GGA1Q9UJY5 639 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 SRPRBQ9Y5M8 271 aaKnown RBP24.88■■□□□ 1.57
CLN6-201ENST00000249806 WNT7AO00755 349 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 NPY5RQ15761 445 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 SLC27A3Q5K4L6 730 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 USP49Q70CQ1 688 aa24.88■■□□□ 1.57
CLN6-201ENST00000249806 POLR2DO15514 142 aaKnown RBP24.87■■□□□ 1.57
CLN6-201ENST00000249806 ATP2B4P23634 1241 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 PLCD1P51178 756 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 PPP4CP60510 307 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 MAPKAPK5Q8IW41 473 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 SLC44A5Q8NCS7 719 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 MKNK2Q9HBH9 465 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 FAM13BQ9NYF5 915 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 POLLQ9UGP5 575 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 SAP30BPQ9UHR5 308 aaKnown RBP24.87■■□□□ 1.57
CLN6-201ENST00000249806 CEP131Q9UPN4 1083 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 PCDHA5Q9Y5H7 936 aa24.87■■□□□ 1.57
CLN6-201ENST00000249806 MDM2Q00987 491 aaPredicted RBP24.86■■□□□ 1.57
CLN6-201ENST00000249806 RTFDC1Q9BY42 306 aaPredicted RBP24.86■■□□□ 1.57
CLN6-201ENST00000249806 CSRNP2Q9H175 543 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 USP17L3A6NCW0 530 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 USP17L4A6NCW7 530 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 TRIM75PA6NK02 468 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 USP17L1Q7RTZ2 530 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 FILIP1Q7Z7B0 1213 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 PDILTQ8N807 584 aa24.86■■□□□ 1.57
CLN6-201ENST00000249806 NOL10Q9BSC4 688 aaKnown RBP24.86■■□□□ 1.57
CLN6-201ENST00000249806 PROM2Q8N271 834 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 KAT14Q9H8E8 782 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 POLRMTO00411 1230 aaKnown RBP24.85■■□□□ 1.57
CLN6-201ENST00000249806 BBOX1O75936 387 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 LDHCP07864 332 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 IL1R1P14778 569 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 KRT27Q7Z3Y8 459 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 LRRC8AQ8IWT6 810 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 ZNF579Q8NAF0 562 aaKnown RBP24.85■■□□□ 1.57
CLN6-201ENST00000249806 TNFRSF25Q93038 417 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 SERTAD1Q9UHV2 236 aa24.85■■□□□ 1.57
CLN6-201ENST00000249806 UQCRHLA0A096LP55 91 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 UQCRHP07919 91 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 BTDP43251 543 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 ADAMTS3O15072 1205 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 SCG2P13521 617 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 DGKHQ86XP1 1220 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 PNMA1Q8ND90 353 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 TBC1D16Q8TBP0 767 aa24.84■■□□□ 1.57
CLN6-201ENST00000249806 SMTNL1A8MU46 457 aa24.83■■□□□ 1.57
CLN6-201ENST00000249806 LMOD1P29536 600 aaPredicted RBP24.83■■□□□ 1.57
CLN6-201ENST00000249806 STAG2Q8N3U4 1231 aa24.83■■□□□ 1.57
CLN6-201ENST00000249806 XPO4Q9C0E2 1151 aaKnown RBP24.83■■□□□ 1.57
CLN6-201ENST00000249806 HSD3B7Q9H2F3 369 aa24.83■■□□□ 1.57
CLN6-201ENST00000249806 BRMS1Q9HCU9 246 aa24.83■■□□□ 1.57
CLN6-201ENST00000249806 IFNKQ9P0W0 207 aa24.83■■□□□ 1.57
CLN6-201ENST00000249806 IGSF3O75054 1194 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 TSPY3P0CV98 308 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 TSPY8P0CW00 308 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 BMP6P22004 513 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 HOXA10P31260 410 aaPredicted RBP24.82■■□□□ 1.56
CLN6-201ENST00000249806 ZNF174Q15697 407 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 AMOTL1Q8IY63 956 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 GRAMD1CQ8IYS0 662 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 C6orf229H3BNL8 230 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 SMC2O95347 1197 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 PRR29P0C7W0 189 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 NLRP5P59047 1200 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 PFKFB3Q16875 520 aaPredicted RBP24.82■■□□□ 1.56
CLN6-201ENST00000249806 MFSD14BQ5SR56 506 aa24.82■■□□□ 1.56
CLN6-201ENST00000249806 ZNF444Q8N0Y2 327 aaPredicted RBP24.82■■□□□ 1.56
CLN6-201ENST00000249806 BRWD3Q6RI45 1802 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 IKBKBO14920 756 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 ATP1A3P13637 1013 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 KIF5BP33176 963 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 POSTNQ15063 836 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 EPSTI1Q96J88 318 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 PODXL2Q9NZ53 605 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 MTMR7Q9Y216 660 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 ROBO3Q96MS0 1386 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 TXNRD1Q16881 649 aa24.81■■□□□ 1.56
CLN6-201ENST00000249806 NAV1Q8NEY1 1877 aa24.8■■□□□ 1.56
CLN6-201ENST00000249806 GPR75-ASB3A0A0A6YYF3 556 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms