RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
LSM8-201ENST00000249299 DNAJC18Q9H819 358 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
LSM8-201ENST00000249299 GGA3Q9NZ52 723 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 SLC12A7Q9Y666 1083 aa15.17■□□□□ 0.02
LSM8-201ENST00000249299 WDR90Q96KV7 1748 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 MYH1P12882 1939 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 CCDC196A0A1B0GTZ2 297 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
LSM8-201ENST00000249299 VEGFAP15692 232 aaPredicted RBP15.16■□□□□ 0.02
LSM8-201ENST00000249299 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
LSM8-201ENST00000249299 ME3Q16798 604 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 APOA5Q6Q788 366 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 TMEM179Q6ZVK1 233 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 CHST3Q7LGC8 479 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 SULF1Q8IWU6 871 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 LRRC2Q9BYS8 371 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
LSM8-201ENST00000249299 SCN4AP35499 1836 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 DDAH1O94760 285 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 GSE1Q14687 1217 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 FAM47AQ5JRC9 791 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 NFXL1Q6ZNB6 911 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 CATIPQ7Z7H3 387 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 STK11IPQ8N1F8 1099 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 GTF3C6Q969F1 213 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 CABP5Q9NP86 173 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 IL17RBQ9NRM6 502 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
LSM8-201ENST00000249299 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 POTECB2RU33 542 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 ZBTB43O43298 467 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 TOP1P11387 765 aaKnown RBP15.14■□□□□ 0.01
LSM8-201ENST00000249299 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 SLC4A8Q2Y0W8 1093 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 RCSD1Q6JBY9 416 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 CPLX2Q6PUV4 134 aaKnown RBP15.14■□□□□ 0.01
LSM8-201ENST00000249299 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 MKL1Q969V6 931 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
LSM8-201ENST00000249299 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 BRPF3Q9ULD4 1205 aa15.14■□□□□ 0.01
LSM8-201ENST00000249299 CTNND1O60716 968 aaKnown RBP15.13■□□□□ 0.01
LSM8-201ENST00000249299 TTLL1O95922 423 aa15.13■□□□□ 0.01
LSM8-201ENST00000249299 TROAPQ12815 778 aa15.13■□□□□ 0.01
LSM8-201ENST00000249299 ABCB5Q2M3G0 1257 aa15.13■□□□□ 0.01
LSM8-201ENST00000249299 ZNF654Q8IZM8 581 aa15.13■□□□□ 0.01
LSM8-201ENST00000249299 KAT14Q9H8E8 782 aa15.13■□□□□ 0.01
LSM8-201ENST00000249299 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
LSM8-201ENST00000249299 ZNF112Q9UJU3 913 aa15.13■□□□□ 0.01
LSM8-201ENST00000249299 ASTN2O75129 1339 aaPredicted RBP15.12■□□□□ 0.01
LSM8-201ENST00000249299 GOLGA8BA8MQT2 603 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 CDKL5O76039 1030 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 ASNSP08243 561 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 AKR1B1P15121 316 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 CAP2P40123 477 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
LSM8-201ENST00000249299 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
LSM8-201ENST00000249299 CDC37L1Q7L3B6 337 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 CEP95Q96GE4 821 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 ZKSCAN3Q9BRR0 538 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 ZNF341Q9BYN7 854 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
LSM8-201ENST00000249299 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 KIF3AQ9Y496 699 aa15.12■□□□□ 0.01
LSM8-201ENST00000249299 UNCXA6NJT0 531 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 PHF20L1A8MW92 1017 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 KIF5BP33176 963 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 GNAQP50148 359 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 KRT26Q7Z3Y9 468 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 PHF12Q96QT6 1004 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 STX8Q9UNK0 236 aa15.11■□□□□ 0.01
LSM8-201ENST00000249299 CPLX1O14810 134 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 LARGE1O95461 756 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 SMARCA1P28370 1054 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 NF2P35240 595 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 SCRN1Q12765 414 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 NBPF12Q5TAG4 269 aaPredicted RBP15.1■□□□□ 0.01
LSM8-201ENST00000249299 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
LSM8-201ENST00000249299 LDHDQ86WU2 507 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 PNMA1Q8ND90 353 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 SH2D4AQ9H788 454 aa15.1■□□□□ 0.01
LSM8-201ENST00000249299 SIPA1L1O43166 1804 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
LSM8-201ENST00000249299 PPP1R12BO60237 982 aaPredicted RBP15.09■□□□□ 0.01
LSM8-201ENST00000249299 NMT2O60551 498 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 GH2P01242 217 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 PDCP20941 246 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 DDIT3P35638 169 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 RTN1Q16799 776 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 NOL9Q5SY16 702 aaKnown RBP15.09■□□□□ 0.01
LSM8-201ENST00000249299 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 CCDC83Q8IWF9 413 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 CTCFLQ8NI51 663 aaPredicted RBP15.09■□□□□ 0.01
LSM8-201ENST00000249299 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms