RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF18P17022 549 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 KRT2P35908 639 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 TROAPQ12815 778 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 PHF20Q9BVI0 1012 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 MYH6P13533 1939 aa29.18■■■□□ 2.26
RAB40C-201ENST00000248139 PTF1AQ7RTS3 328 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 ZNF397Q8NF99 534 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-201ENST00000248139 FEZ1Q99689 392 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 DESI2Q9BSY9 194 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 OGFRQ9NZT2 677 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 ANAPC4Q9UJX5 808 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 PHLPP1O60346 1717 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 TEX33O43247 280 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 CCDC93Q567U6 631 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 NT5DC1Q5TFE4 455 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 TOGARAM2Q6ZUX3 1019 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 URI1O94763 535 aaPredicted RBP29.17■■■□□ 2.26
RAB40C-201ENST00000248139 MLKLQ8NB16 471 aa29.17■■■□□ 2.26
RAB40C-201ENST00000248139 VWA3AA6NCI4 1184 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 TC2NQ8N9U0 490 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 LINC00116Q8NCU8 138 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 CEP131Q9UPN4 1083 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 COL16A1Q07092 1604 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-201ENST00000248139 RTL9Q8NET4 1388 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 PRDX5P30044 214 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 DMTNQ08495 405 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 IQCA1Q86XH1 822 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 SRBD1Q8N5C6 995 aaKnown RBP29.16■■■□□ 2.26
RAB40C-201ENST00000248139 ZNF579Q8NAF0 562 aaKnown RBP29.16■■■□□ 2.26
RAB40C-201ENST00000248139 CPLX3Q8WVH0 158 aa29.16■■■□□ 2.26
RAB40C-201ENST00000248139 BAG1Q99933 345 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-201ENST00000248139 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.16■■■□□ 2.265e-6■■■■□ 23
RAB40C-201ENST00000248139 MECOMQ03112 1051 aa29.15■■■□□ 2.26
RAB40C-201ENST00000248139 MTF1Q14872 753 aa29.15■■■□□ 2.26
RAB40C-201ENST00000248139 ENOX1Q8TC92 643 aaKnown RBP29.15■■■□□ 2.26
RAB40C-201ENST00000248139 PPP2R2CQ9Y2T4 447 aa29.15■■■□□ 2.26
RAB40C-201ENST00000248139 KCNJ6P48051 423 aa29.15■■■□□ 2.26
RAB40C-201ENST00000248139 TBC1D9BQ66K14 1250 aa29.15■■■□□ 2.26
RAB40C-201ENST00000248139 TBX2Q13207 712 aaPredicted RBP29.14■■■□□ 2.26
RAB40C-201ENST00000248139 NPY5RQ15761 445 aa29.14■■■□□ 2.26
RAB40C-201ENST00000248139 EPC1Q9H2F5 836 aa29.14■■■□□ 2.26
RAB40C-201ENST00000248139 BLZF1Q9H2G9 400 aa29.14■■■□□ 2.26
RAB40C-201ENST00000248139 BSDC1Q9NW68 430 aaPredicted RBP29.14■■■□□ 2.26
RAB40C-201ENST00000248139 UBE4AQ14139 1066 aa29.14■■■□□ 2.25
RAB40C-201ENST00000248139 SPECC1LQ69YQ0 1117 aa29.14■■■□□ 2.25
RAB40C-201ENST00000248139 PAGE5Q96GU1 130 aa29.14■■■□□ 2.25
RAB40C-201ENST00000248139 ZNF446Q9NWS9 450 aa29.14■■■□□ 2.25
RAB40C-201ENST00000248139 ZNF652Q9Y2D9 606 aa29.14■■■□□ 2.25
RAB40C-201ENST00000248139 PRPF3O43395 683 aaKnown RBP29.13■■■□□ 2.25
RAB40C-201ENST00000248139 XBP1P17861 261 aa29.13■■■□□ 2.25
RAB40C-201ENST00000248139 NSUN4Q96CB9 384 aaKnown RBP29.13■■■□□ 2.25
RAB40C-201ENST00000248139 SRP68Q9UHB9 627 aaKnown RBP29.13■■■□□ 2.25
RAB40C-201ENST00000248139 CACNA1SQ13698 1873 aa29.13■■■□□ 2.25
RAB40C-201ENST00000248139 CDC25AP30304 524 aa29.13■■■□□ 2.25
RAB40C-201ENST00000248139 TXNRD3Q86VQ6 643 aa29.13■■■□□ 2.25
RAB40C-201ENST00000248139 MTMR7Q9Y216 660 aa29.13■■■□□ 2.25
RAB40C-201ENST00000248139 PTGDRQ13258 359 aa29.12■■■□□ 2.25
RAB40C-201ENST00000248139 WDR24Q96S15 920 aa29.12■■■□□ 2.25
RAB40C-201ENST00000248139 PIK3AP1Q6ZUJ8 805 aa29.12■■■□□ 2.25
RAB40C-201ENST00000248139 PLCH1Q4KWH8 1693 aa29.12■■■□□ 2.25
RAB40C-201ENST00000248139 MYH13Q9UKX3 1938 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 PLCD1P51178 756 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 MTA3Q9BTC8 594 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 ST7Q9NRC1 585 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 A0A0U1RQJ8 604 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 KARSQ15046 597 aaKnown RBP29.11■■■□□ 2.25
RAB40C-201ENST00000248139 ARHGAP29Q52LW3 1261 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 SPATA20Q8TB22 786 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 ATRIPQ8WXE1 791 aa29.11■■■□□ 2.25
RAB40C-201ENST00000248139 IRX2Q9BZI1 471 aaPredicted RBP29.11■■■□□ 2.25
RAB40C-201ENST00000248139 ARHGAP6O43182 974 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 TMTC3Q6ZXV5 915 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 ELOA2Q8IYF1 753 aaPredicted RBP29.1■■■□□ 2.25
RAB40C-201ENST00000248139 BRIP1Q9BX63 1249 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 CARD6Q9BX69 1037 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 DCP1AQ9NPI6 582 aaPredicted RBP29.1■■■□□ 2.25
RAB40C-201ENST00000248139 MCM7P33993 719 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 DPYDQ12882 1025 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 TTC38Q5R3I4 469 aa29.1■■■□□ 2.25
RAB40C-201ENST00000248139 RCAN1P53805 252 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 SF3B3Q15393 1217 aaKnown RBP29.09■■■□□ 2.25
RAB40C-201ENST00000248139 CREBRFQ8IUR6 639 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 DACH1Q9UI36 760 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 SLFN14P0C7P3 912 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 GNG11P61952 73 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 NR1I3Q14994 352 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 DUOX1Q9NRD9 1551 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 CNTNAP5Q8WYK1 1306 aa29.09■■■□□ 2.25
RAB40C-201ENST00000248139 SOWAHDA6NJG2 315 aa29.08■■■□□ 2.25
RAB40C-201ENST00000248139 KANK3Q6NY19 840 aa29.08■■■□□ 2.25
RAB40C-201ENST00000248139 TNFRSF25Q93038 417 aa29.08■■■□□ 2.25
RAB40C-201ENST00000248139 PARP3Q9Y6F1 533 aa29.08■■■□□ 2.25
RAB40C-201ENST00000248139 MORC2Q9Y6X9 1032 aaPredicted RBP29.08■■■□□ 2.25
RAB40C-201ENST00000248139 NLRP5P59047 1200 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 IL17AQ16552 155 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 RASGRP4Q8TDF6 673 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 USP17L8P0C7I0 530 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 DHX8Q14562 1220 aaKnown RBP29.07■■■□□ 2.24
RAB40C-201ENST00000248139 APTXQ7Z2E3 356 aaKnown RBP29.07■■■□□ 2.24
RAB40C-201ENST00000248139 CTCFLQ8NI51 663 aaPredicted RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms