RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SLC1A4P43007 532 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 NIM1KQ8IY84 436 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
SIN3B-201ENST00000248054 A0A1W2PQ27 194 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 A0A1W2PQ64 194 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 A0A1W2PQD8 194 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 GCOM1H8Y6P7 765 aaPredicted RBP17.73■□□□□ 0.43
SIN3B-201ENST00000248054 MYZAPP0CAP1 466 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 LIFRP42702 1097 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 ELF2Q15723 593 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 APOA5Q6Q788 366 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 TAX1BP1Q86VP1 789 aa17.73■□□□□ 0.43
SIN3B-201ENST00000248054 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
SIN3B-201ENST00000248054 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
SIN3B-201ENST00000248054 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 CMA1P23946 247 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 SWAP70Q9UH65 585 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 TRIM14Q14142 442 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 FAM47AQ5JRC9 791 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
SIN3B-201ENST00000248054 RTEL1Q9NZ71 1219 aa17.72■□□□□ 0.43
SIN3B-201ENST00000248054 UBR1Q8IWV7 1749 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.43
SIN3B-201ENST00000248054 DLGAP5Q15398 846 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
SIN3B-201ENST00000248054 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 IMPACTQ9P2X3 320 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 POLR2DO15514 142 aaKnown RBP17.71■□□□□ 0.43
SIN3B-201ENST00000248054 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
SIN3B-201ENST00000248054 VPS72Q15906 364 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 BARGINQ6ZT62 677 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 CNGA4Q8IV77 575 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 FMNL3Q8IVF7 1028 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 CEP112Q8N8E3 955 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 PYCARDQ9ULZ3 195 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 KCNJ14Q9UNX9 436 aa17.71■□□□□ 0.43
SIN3B-201ENST00000248054 SCG2P13521 617 aa17.71■□□□□ 0.42
SIN3B-201ENST00000248054 REXO1Q8N1G1 1221 aaKnown RBP17.71■□□□□ 0.42
SIN3B-201ENST00000248054 ERO1AQ96HE7 468 aa17.71■□□□□ 0.42
SIN3B-201ENST00000248054 USP28Q96RU2 1077 aa17.71■□□□□ 0.42
SIN3B-201ENST00000248054 CARMIL3Q8ND23 1372 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 KRT13P13646 458 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 ARFGAP3Q9NP61 516 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 MCAMP43121 646 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 TTC31Q49AM3 519 aaPredicted RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 WDR78Q5VTH9 848 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 CBX8Q9HC52 389 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 VPS54Q9P1Q0 977 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 SH2B2O14492 632 aaPredicted RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 KRT83P78385 493 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 BRIP1Q9BX63 1249 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 PIH1D3Q9NQM4 214 aaKnown RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 AKR1B10O60218 316 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 CCDC175P0C221 793 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 TRAPPC10P48553 1259 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 POSTNQ15063 836 aa17.7■□□□□ 0.42
SIN3B-201ENST00000248054 RC3H1Q5TC82 1133 aaKnown RBP17.7■□□□□ 0.42
SIN3B-201ENST00000248054 SPATA31A1Q5TZJ5 1347 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 FAM13AO94988 1023 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 IVLP07476 585 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 RXRBP28702 533 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 TNFAIP1Q13829 316 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 BLIDQ8IZY5 108 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 PNMA2Q9UL42 364 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 TRIM37O94972 964 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 HS2ST1Q7LGA3 356 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 RPL13P26373 211 aaKnown RBP17.69■□□□□ 0.42
SIN3B-201ENST00000248054 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 CCDC174Q6PII3 467 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
SIN3B-201ENST00000248054 POLR3EQ9NVU0 708 aa17.69■□□□□ 0.42
SIN3B-201ENST00000248054 IFFO1Q0D2I5 559 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 ALX1Q15699 326 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 TRIML1Q8N9V2 468 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 SPAG5Q96R06 1193 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.68■□□□□ 0.42
SIN3B-201ENST00000248054 CTAGE15A4D2H0 777 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 CTAGE8P0CG41 777 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 SMC1AQ14683 1233 aaKnown RBP17.68■□□□□ 0.42
SIN3B-201ENST00000248054 CTAGE6Q86UF2 777 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 CTAGE4Q8IX94 777 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 GIMAP7Q8NHV1 300 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 TBC1D5Q92609 795 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 hCG_1984214I3L0E3 225 aa17.68■□□□□ 0.42
SIN3B-201ENST00000248054 PPP6R2O75170 966 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms