RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PKN1Q16512 942 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 HOMER1Q86YM7 354 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 TRMT44Q8IYL2 757 aaKnown RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 MLKLQ8NB16 471 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 OGFRQ9NZT2 677 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 NFE2L3Q9Y4A8 694 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 CCP110O43303 1012 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 PRDM1O75626 825 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 KMT5BQ4FZB7 885 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
HIF3A-202ENST00000244303 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 ZNF397Q8NF99 534 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-202ENST00000244303 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 DACH1Q9UI36 760 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 GNPATO15228 680 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 XBP1P17861 261 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 PPP2R5BQ15173 497 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
HIF3A-202ENST00000244303 PHF20Q9BVI0 1012 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
HIF3A-202ENST00000244303 KIF20AO95235 890 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 TUBB4AP04350 444 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 ZNF18P17022 549 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 CDK11BP21127 795 aaKnown RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 KRT2P35908 639 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 ETF1P62495 437 aaKnown RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 FUT2Q10981 343 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 TMEM139Q8IV31 216 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 TRIML1Q8N9V2 468 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 ENOX1Q8TC92 643 aaKnown RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 ZNF384Q8TF68 577 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 DDX41Q9UJV9 622 aaKnown RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 ZPR1O75312 459 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 TBX2Q13207 712 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 CAVIN4Q5BKX8 364 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 CATIPQ7Z7H3 387 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-202ENST00000244303 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 MED15Q96RN5 788 aa16.43■□□□□ 0.22
HIF3A-202ENST00000244303 LAMB1P07942 1786 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 BAZ2BQ9UIF8 2168 aaKnown RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 A0A087X0B3 334 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 PRPF3O43395 683 aaKnown RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 FBXO38Q6PIJ6 1188 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 REXO1L1PQ8IX06 675 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 SPATA20Q8TB22 786 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 DHX58Q96C10 678 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 FAM84BQ96KN1 310 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 AATFQ9NY61 560 aaKnown RBP eCLIP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 DNAI1Q9UI46 699 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 BTAF1O14981 1849 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 PHLPP2Q6ZVD8 1323 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 NPHP1O15259 732 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 IGSF3O75054 1194 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 RPS8P62241 208 aaKnown RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 TRIM65Q6PJ69 517 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 EPSTI1Q96J88 318 aa16.42■□□□□ 0.22
HIF3A-202ENST00000244303 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 SAMSN1Q9NSI8 373 aaKnown RBP16.42■□□□□ 0.22
HIF3A-202ENST00000244303 WNT7AO00755 349 aa16.41■□□□□ 0.22
HIF3A-202ENST00000244303 ARHGAP6O43182 974 aa16.41■□□□□ 0.22
HIF3A-202ENST00000244303 TROAPQ12815 778 aa16.41■□□□□ 0.22
HIF3A-202ENST00000244303 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
HIF3A-202ENST00000244303 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
HIF3A-202ENST00000244303 CCDC24Q8N4L8 307 aa16.41■□□□□ 0.22
HIF3A-202ENST00000244303 RBM28Q9NW13 759 aaKnown RBP16.41■□□□□ 0.22
HIF3A-202ENST00000244303 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
HIF3A-202ENST00000244303 PLCD1P51178 756 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 EVX2Q03828 476 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 SPECC1LQ69YQ0 1117 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 AMIGO3Q86WK7 504 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
HIF3A-202ENST00000244303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.4■□□□□ 0.22
HIF3A-202ENST00000244303 FANCGO15287 622 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 AFMP43652 599 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 NOM1Q5C9Z4 860 aaKnown RBP16.4■□□□□ 0.22
HIF3A-202ENST00000244303 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 TC2NQ8N9U0 490 aa16.4■□□□□ 0.22
HIF3A-202ENST00000244303 BAG1Q99933 345 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-202ENST00000244303 MORC2Q9Y6X9 1032 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-202ENST00000244303 USP17L12C9JPN9 530 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 USP17L21D6R901 530 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 ZSCAN12O43309 604 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 FGRP09769 529 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
HIF3A-202ENST00000244303 ZNF771Q7L3S4 317 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-202ENST00000244303 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms