RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 C14orf93Q9H972 538 aaKnown RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 AATFQ9NY61 560 aaKnown RBP eCLIP8.35□□□□□ -1.07
RIF1-201ENST00000243326 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 IFNL2Q8IZJ0 200 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 IQUBQ8NA54 791 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 MRFAP1L1Q96HT8 127 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 CD2APQ9Y5K6 639 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 ERMNQ8TAM6 284 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 URB1O60287 2271 aaKnown RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 ARHGAP6O43182 974 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 NBPF6Q5VWK0 638 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 NBPF5PQ86XG9 351 aaPredicted RBP8.34□□□□□ -1.07
RIF1-201ENST00000243326 POTEDQ86YR6 584 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 NBPF4Q96M43 638 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 MAN1A1P33908 653 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 ATP6V1AP38606 617 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 PAK2Q13177 524 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 RILPQ96NA2 401 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 POLR2FP61218 127 aaKnown RBP8.34□□□□□ -1.07
RIF1-201ENST00000243326 SCRN1Q12765 414 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 SNCBQ16143 134 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 MLXIPLQ9NP71 852 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 SFMBT2Q5VUG0 894 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 FAM47EQ6ZV65 393 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 SAR1BQ9Y6B6 198 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 GOLGA8HP0CJ92 632 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 MYCLP12524 364 aaPredicted RBP8.34□□□□□ -1.07
RIF1-201ENST00000243326 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 CCDC13Q8IYE1 715 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 DCLK2Q8N568 766 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 SDR42E1Q8WUS8 393 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 KRIT1O00522 736 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 NXNQ6DKJ4 435 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 STMN4Q9H169 189 aaPredicted RBP8.34□□□□□ -1.07
RIF1-201ENST00000243326 SLC39A2Q9NP94 309 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 STIM2Q9P246 746 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 PDHA1P08559 390 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 IL15P40933 162 aaPredicted RBP8.34□□□□□ -1.07
RIF1-201ENST00000243326 POLE2P56282 527 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 C6orf50Q9HD87 102 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 SPTLC3Q9NUV7 552 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 TRIM66O15016 1216 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 CCDC144BQ3MJ40 725 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 CCDC26Q8TAB7 109 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 MYO9BQ13459 2157 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 EHHADHQ08426 723 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 DENND2CQ68D51 928 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.07
RIF1-201ENST00000243326 ANTXR1Q9H6X2 564 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 TTC21AQ8NDW8 1320 aa8.34□□□□□ -1.07
RIF1-201ENST00000243326 CABP7Q86V35 215 aa8.34□□□□□ -1.08
RIF1-201ENST00000243326 LMBR1Q8WVP7 490 aa8.34□□□□□ -1.08
RIF1-201ENST00000243326 METTL14Q9HCE5 456 aaKnown RBP8.34□□□□□ -1.08
RIF1-201ENST00000243326 ABCC1P33527 1531 aa8.34□□□□□ -1.08
RIF1-201ENST00000243326 SYCP2Q9BX26 1530 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 POLD1P28340 1107 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 RNF10Q8N5U6 811 aaKnown RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 AP1M1Q9BXS5 423 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 VEZTQ9HBM0 779 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 CUTAO60888 179 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 SEPT6Q14141 434 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 TTLL3Q9Y4R7 772 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 TECP42680 631 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 ARFGAP2Q8N6H7 521 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 KIAA1468Q9P260 1216 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 INPP5FQ9Y2H2 1132 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 CLCN6P51797 869 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 SLC52A1Q9NWF4 448 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 M0R2C6 588 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 ZNF589Q86UQ0 364 aaPredicted RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 CACNA2D3Q8IZS8 1091 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 TTC14Q96N46 770 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 ZNF532Q9HCE3 1301 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 NCK2O43639 380 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 GEN1Q17RS7 908 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 IFT74Q96LB3 600 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 TSGA10Q9BZW7 698 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 MAP3K5Q99683 1374 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 BICDL2A1A5D9 508 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 BTBD18B2RXH4 712 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 BACH1O14867 736 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 STX2P32856 288 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 KLHL30Q0D2K2 578 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 SH2D4BQ5SQS7 431 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 SNX29Q8TEQ0 813 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 PEG3Q9GZU2 1588 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 CCDC152Q4G0S7 254 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 RFX8Q6ZV50 586 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 KIAA1524Q8TCG1 905 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 TBK1Q9UHD2 729 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 NOL3O60936 208 aaKnown RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 ACTN2P35609 894 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 RPS6KA1Q15418 735 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms