RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
EGR1-201ENST00000239938 MSL3Q8N5Y2 521 aaKnown RBP15.8■□□□□ 0.12
EGR1-201ENST00000239938 PAGE5Q96GU1 130 aa15.8■□□□□ 0.12
EGR1-201ENST00000239938 GREM2Q9H772 168 aa15.8■□□□□ 0.12
EGR1-201ENST00000239938 NID2Q14112 1375 aa15.8■□□□□ 0.12
EGR1-201ENST00000239938 TTLL11Q8NHH1 800 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 ZNF512BQ96KM6 892 aaPredicted RBP15.79■□□□□ 0.12
EGR1-201ENST00000239938 PLA2G12BQ9BX93 195 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 PRKAB2O43741 272 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 AMPD2Q01433 879 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 SAFBQ15424 915 aaKnown RBP eCLIP15.79■□□□□ 0.12
EGR1-201ENST00000239938 NCAPH2Q6IBW4 605 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 KANK3Q6NY19 840 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
EGR1-201ENST00000239938 ZNF330Q9Y3S2 320 aaPredicted RBP15.79■□□□□ 0.12
EGR1-201ENST00000239938 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
EGR1-201ENST00000239938 ITGA6P23229 1130 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 CCT6AP40227 531 aaKnown RBP15.78■□□□□ 0.12
EGR1-201ENST00000239938 ALX1Q15699 326 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 RTN1Q16799 776 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 WASF1Q92558 559 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 STAMQ92783 540 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 AIDAQ96BJ3 306 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 CWC15Q9P013 229 aaKnown RBP15.78■□□□□ 0.12
EGR1-201ENST00000239938 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
EGR1-201ENST00000239938 PATL2C9JE40 543 aaKnown RBP15.77■□□□□ 0.12
EGR1-201ENST00000239938 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
EGR1-201ENST00000239938 TRIM10Q9UDY6 481 aa15.77■□□□□ 0.12
EGR1-201ENST00000239938 PLEKHG2Q9H7P9 1386 aa15.77■□□□□ 0.12
EGR1-201ENST00000239938 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
EGR1-201ENST00000239938 GSG1L2A8MUP6 293 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 RPS6KA5O75582 802 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 SYMPKQ92797 1274 aaKnown RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 NAPGQ99747 312 aaPredicted RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 ARMT1Q9H993 441 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 ABHD10Q9NUJ1 306 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 AATFQ9NY61 560 aaKnown RBP eCLIP15.77■□□□□ 0.11
EGR1-201ENST00000239938 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 REXO2Q9Y3B8 237 aaKnown RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 KRT31Q15323 416 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 AKNAD1Q5T1N1 836 aa15.77■□□□□ 0.11
EGR1-201ENST00000239938 TTF2Q9UNY4 1162 aaKnown RBP15.77■□□□□ 0.11
EGR1-201ENST00000239938 PAPPAQ13219 1627 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 CTAGE15A4D2H0 777 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 MBD4O95243 580 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 DEXIO95424 95 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 CTAGE8P0CG41 777 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 NOP2P46087 812 aaKnown RBP15.76■□□□□ 0.11
EGR1-201ENST00000239938 TRIM28Q13263 835 aaKnown RBP15.76■□□□□ 0.11
EGR1-201ENST00000239938 RRP12Q5JTH9 1297 aaKnown RBP15.76■□□□□ 0.11
EGR1-201ENST00000239938 LRRC31Q6UY01 552 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 CTAGE6Q86UF2 777 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 CNGA4Q8IV77 575 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 CTAGE4Q8IX94 777 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 SMIM22K7EJ46 135 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 ERLIN1O75477 346 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 ARID4AP29374 1257 aaPredicted RBP15.76■□□□□ 0.11
EGR1-201ENST00000239938 TUBB2AQ13885 445 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 TRIM22Q8IYM9 498 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 CHP1Q99653 195 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 TUBB2BQ9BVA1 445 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 NAPBQ9H115 298 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 ITIH6Q6UXX5 1313 aa15.76■□□□□ 0.11
EGR1-201ENST00000239938 LEKR1Q6ZMV7 388 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 SLF1Q9BQI6 1058 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
EGR1-201ENST00000239938 TFR2Q9UP52 801 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 CTNND2Q9UQB3 1225 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 TIAM2Q8IVF5 1701 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 LRRC10BA6NIK2 292 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 SNAP23O00161 211 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 SYF2O95926 243 aaKnown RBP15.75■□□□□ 0.11
EGR1-201ENST00000239938 WHAMMP3Q1A5X7 153 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 HDAC6Q9UBN7 1215 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 MYO6Q9UM54 1294 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 MYH6P13533 1939 aa15.75■□□□□ 0.11
EGR1-201ENST00000239938 SEMA3EO15041 775 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 PDE8BO95263 885 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 HLFQ16534 295 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 CT47A1Q5JQC4 288 aaPredicted RBP15.74■□□□□ 0.11
EGR1-201ENST00000239938 MFSD6Q6ZSS7 791 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 MAGEB6Q8N7X4 407 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 FANCBQ8NB91 859 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 CCDC102AQ96A19 550 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 CTAGE1Q96RT6 745 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 MTRQ99707 1265 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 VPS16Q9H269 839 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 CNNM1Q9NRU3 951 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 XDHP47989 1333 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 EIF3JO75822 258 aaKnown RBP15.74■□□□□ 0.11
EGR1-201ENST00000239938 WTAPQ15007 396 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 PKN1Q16512 942 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 WDR93Q6P2C0 686 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 TMTC1Q8IUR5 882 aa15.74■□□□□ 0.11
EGR1-201ENST00000239938 HELBQ8NG08 1087 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms