RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 RTN4Q9NQC3 1192 aaKnown RBP26.82■■□□□ 1.88
MSX2-201ENST00000239243 IL17RBQ9NRM6 502 aa26.82■■□□□ 1.88
MSX2-201ENST00000239243 NDUFA8P51970 172 aa26.81■■□□□ 1.88
MSX2-201ENST00000239243 ANO6Q4KMQ2 910 aa26.81■■□□□ 1.88
MSX2-201ENST00000239243 USP25Q9UHP3 1055 aa26.81■■□□□ 1.88
MSX2-201ENST00000239243 PNMA1Q8ND90 353 aa26.81■■□□□ 1.88
MSX2-201ENST00000239243 PHF20Q9BVI0 1012 aa26.81■■□□□ 1.88
MSX2-201ENST00000239243 MYH1P12882 1939 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 RASA1P20936 1047 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 GNAQP50148 359 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 OLFM4Q6UX06 510 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 PODNQ7Z5L7 613 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 CCDC39Q9UFE4 941 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 CEP131Q9UPN4 1083 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 CUTAO60888 179 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 KRT2P35908 639 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 SRBD1Q8N5C6 995 aaKnown RBP26.8■■□□□ 1.88
MSX2-201ENST00000239243 SDF4Q9BRK5 362 aa26.8■■□□□ 1.88
MSX2-201ENST00000239243 MARCKSP29966 332 aaPredicted RBP26.79■■□□□ 1.88
MSX2-201ENST00000239243 CDK8P49336 464 aa26.79■■□□□ 1.88
MSX2-201ENST00000239243 STX1AQ16623 288 aa26.79■■□□□ 1.88
MSX2-201ENST00000239243 CAMKK2Q96RR4 588 aa26.79■■□□□ 1.88
MSX2-201ENST00000239243 VPS54Q9P1Q0 977 aa26.79■■□□□ 1.88
MSX2-201ENST00000239243 TTF2Q9UNY4 1162 aaKnown RBP26.79■■□□□ 1.88
MSX2-201ENST00000239243 WDHD1O75717 1129 aaPredicted RBP26.78■■□□□ 1.88
MSX2-201ENST00000239243 CNKSR1Q969H4 720 aa26.78■■□□□ 1.88
MSX2-201ENST00000239243 DOK7Q18PE1 504 aa26.78■■□□□ 1.88
MSX2-201ENST00000239243 ZSCAN30Q86W11 494 aa26.78■■□□□ 1.88
MSX2-201ENST00000239243 ANO8Q9HCE9 1232 aaPredicted RBP26.78■■□□□ 1.88
MSX2-201ENST00000239243 RRAGDQ9NQL2 400 aaPredicted RBP26.78■■□□□ 1.88
MSX2-201ENST00000239243 RGS17Q9UGC6 210 aaPredicted RBP26.78■■□□□ 1.88
MSX2-201ENST00000239243 PFKFB1P16118 471 aa26.77■■□□□ 1.88
MSX2-201ENST00000239243 EZH2Q15910 746 aaKnown RBP26.77■■□□□ 1.88
MSX2-201ENST00000239243 CERS5Q8N5B7 392 aa26.77■■□□□ 1.88
MSX2-201ENST00000239243 SLC44A5Q8NCS7 719 aa26.77■■□□□ 1.88
MSX2-201ENST00000239243 TIGD1Q96MW7 591 aa26.77■■□□□ 1.88
MSX2-201ENST00000239243 NR5A1Q13285 461 aa26.77■■□□□ 1.88
MSX2-201ENST00000239243 GRM4Q14833 912 aa26.77■■□□□ 1.88
MSX2-201ENST00000239243 FAM237AA0A1B0GTK4 181 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 USP17L3A6NCW0 530 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 USP17L4A6NCW7 530 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 ZNF202O95125 648 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 ADCY5O95622 1261 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 SCG2P13521 617 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 ZNF165P49910 485 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 TOB1P50616 345 aaPredicted RBP26.76■■□□□ 1.87
MSX2-201ENST00000239243 POTEAQ6S8J7 498 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 HHIPL2Q6UWX4 724 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 USP17L1Q7RTZ2 530 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 KRI1Q8N9T8 703 aaKnown RBP26.76■■□□□ 1.87
MSX2-201ENST00000239243 NEDD1Q8NHV4 660 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 CBX8Q9HC52 389 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 ANO10Q9NW15 660 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 SNED1Q8TER0 1413 aa26.76■■□□□ 1.87
MSX2-201ENST00000239243 PFKFB3Q16875 520 aaPredicted RBP26.75■■□□□ 1.87
MSX2-201ENST00000239243 MORC2Q9Y6X9 1032 aaPredicted RBP26.75■■□□□ 1.87
MSX2-201ENST00000239243 FKBP1AP62942 108 aaKnown RBP26.75■■□□□ 1.87
MSX2-201ENST00000239243 EN1Q05925 392 aaPredicted RBP26.75■■□□□ 1.87
MSX2-201ENST00000239243 F8W031 263 aaPredicted RBP26.74■■□□□ 1.87
MSX2-201ENST00000239243 RESP18Q5W5W9 173 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 OXER1Q8TDS5 423 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 TEKT1Q969V4 418 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 DNAJC25Q9H1X3 360 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 STX8Q9UNK0 236 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 HPSEQ9Y251 543 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 PTMAP06454 111 aaKnown RBP26.74■■□□□ 1.87
MSX2-201ENST00000239243 SYKP43405 635 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 LZTS2Q9BRK4 669 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 CABP5Q9NP86 173 aa26.74■■□□□ 1.87
MSX2-201ENST00000239243 NOL7Q9UMY1 257 aaKnown RBP26.74■■□□□ 1.87
MSX2-201ENST00000239243 hCG_1642624A0A1W2PR95 340 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 CLCN1P35523 988 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 SHC4Q6S5L8 630 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 BMP15O95972 392 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 MSNP26038 577 aaKnown RBP26.73■■□□□ 1.87
MSX2-201ENST00000239243 ZRSR1Q15695 479 aaKnown RBP26.73■■□□□ 1.87
MSX2-201ENST00000239243 CC2D2BQ6DHV5 1058 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 LUZP1Q86V48 1076 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 SHISA4Q96DD7 197 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 TMEM47Q9BQJ4 181 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 SH3GLB2Q9NR46 395 aa26.73■■□□□ 1.87
MSX2-201ENST00000239243 KIAA1468Q9P260 1216 aa26.72■■□□□ 1.87
MSX2-201ENST00000239243 CALML3P27482 149 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 PLCB2Q00722 1185 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 STRIP1Q5VSL9 837 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 MRIQ9BWK5 157 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 SLX4Q8IY92 1834 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 PTPREP23469 700 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 ZNF579Q8NAF0 562 aaKnown RBP26.71■■□□□ 1.87
MSX2-201ENST00000239243 NAT10Q9H0A0 1025 aaKnown RBP26.71■■□□□ 1.87
MSX2-201ENST00000239243 USP40Q9NVE5 1235 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 MAD2L2Q9UI95 211 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 PLIN4Q96Q06 1357 aa26.71■■□□□ 1.87
MSX2-201ENST00000239243 TRIM75PA6NK02 468 aa26.7■■□□□ 1.87
MSX2-201ENST00000239243 NLRP5P59047 1200 aa26.7■■□□□ 1.87
MSX2-201ENST00000239243 PICALMQ13492 652 aa26.7■■□□□ 1.87
MSX2-201ENST00000239243 FAM177A1Q8N128 213 aaPredicted RBP26.7■■□□□ 1.87
MSX2-201ENST00000239243 DBNDD1Q9H9R9 158 aa26.7■■□□□ 1.87
MSX2-201ENST00000239243 PCDHB6Q9Y5E3 794 aa26.7■■□□□ 1.87
MSX2-201ENST00000239243 FAM13BQ9NYF5 915 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms