RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 FBXL16Q8N461 479 aa10.96□□□□□ -0.66
TGFB3-201ENST00000238682 SREK1Q8WXA9 508 aaKnown RBP10.96□□□□□ -0.66
TGFB3-201ENST00000238682 EDC3Q96F86 508 aaKnown RBP10.96□□□□□ -0.66
TGFB3-201ENST00000238682 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 GPR25O00155 361 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 RBM5P52756 815 aaKnown RBP eCLIP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 IMMTQ16891 758 aaKnown RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 FAM151AQ8WW52 585 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 PRMT6Q96LA8 375 aaPredicted RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 KLHL42Q9P2K6 505 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 ARPP21Q9UBL0 812 aaPredicted RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 MYH2Q9UKX2 1941 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 SPDYE5A6NIY4 337 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 M0R2C6 588 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 TPD52L2O43399 206 aaKnown RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 PPIL2Q13356 520 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 MXD3Q9BW11 206 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 RNF41Q9H4P4 317 aaPredicted RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 CNNM2Q9H8M5 875 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 SLC45A1Q9Y2W3 748 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 RBM8AQ9Y5S9 174 aaKnown RBP10.95□□□□□ -0.66
TGFB3-201ENST00000238682 ROBO3Q96MS0 1386 aa10.95□□□□□ -0.66
TGFB3-201ENST00000238682 NAV1Q8NEY1 1877 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
TGFB3-201ENST00000238682 SLC3A2P08195 630 aaKnown RBP10.94□□□□□ -0.66
TGFB3-201ENST00000238682 CETPP11597 493 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 TCF3P15923 654 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 FAM193AP78312 1265 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 ERO1BQ86YB8 467 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.66
TGFB3-201ENST00000238682 PUS7LQ9H0K6 701 aaKnown RBP10.94□□□□□ -0.66
TGFB3-201ENST00000238682 VEZTQ9HBM0 779 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF287Q9HBT7 754 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 MBD4O95243 580 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 CCDC178Q5BJE1 867 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 TEPSINQ96N21 525 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF830Q96NB3 372 aaPredicted RBP10.94□□□□□ -0.66
TGFB3-201ENST00000238682 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 YY1AP1Q9H869 796 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF112Q9UJU3 913 aa10.94□□□□□ -0.66
TGFB3-201ENST00000238682 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
TGFB3-201ENST00000238682 PRDX5P30044 214 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 MLLT1Q03111 559 aaPredicted RBP10.93□□□□□ -0.66
TGFB3-201ENST00000238682 PPATQ06203 517 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 ANKRD1Q15327 319 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
TGFB3-201ENST00000238682 SLKQ9H2G2 1235 aaPredicted RBP10.93□□□□□ -0.66
TGFB3-201ENST00000238682 RBBP6Q7Z6E9 1792 aaKnown RBP10.93□□□□□ -0.66
TGFB3-201ENST00000238682 ST18O60284 1047 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 TRPA1O75762 1119 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 PPP1R37O75864 691 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 ZFYVE28Q9HCC9 887 aa10.93□□□□□ -0.66
TGFB3-201ENST00000238682 SLC27A2O14975 620 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 FGRP09769 529 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 IFNL3Q8IZI9 196 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 SLC4A4Q9Y6R1 1079 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 OTOFQ9HC10 1997 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 GSG1L2A8MUP6 293 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF213O14771 459 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 MAP3K10Q02779 954 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 SNAPC2Q13487 334 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 ANKRD23Q86SG2 305 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 KRT23Q9C075 422 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 NAPBQ9H115 298 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 DHX36Q9H2U1 1008 aaKnown RBP10.92□□□□□ -0.66
TGFB3-201ENST00000238682 ZSWIM6Q9HCJ5 1215 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
TGFB3-201ENST00000238682 DAGLAQ9Y4D2 1042 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
TGFB3-201ENST00000238682 ATRNL1Q5VV63 1379 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 CDK5RAP2Q96SN8 1893 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 CXCL11O14625 94 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 TBC1D12O60347 775 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 PTH1RQ03431 593 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 APOBEC3HQ6NTF7 200 aaKnown RBP10.91□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF384Q8TF68 577 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 EHD4Q9H223 541 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 SNX14Q9Y5W7 946 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 GPR37O15354 613 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF16P17020 682 aaPredicted RBP10.91□□□□□ -0.66
TGFB3-201ENST00000238682 BTDP43251 543 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 NBPF12Q5TAG4 269 aaPredicted RBP10.91□□□□□ -0.66
TGFB3-201ENST00000238682 VPS53Q5VIR6 699 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
TGFB3-201ENST00000238682 LCORLQ8N3X6 602 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 TDRD3Q9H7E2 651 aaKnown RBP10.91□□□□□ -0.66
TGFB3-201ENST00000238682 KCNH4Q9UQ05 1017 aa10.91□□□□□ -0.66
TGFB3-201ENST00000238682 F8W031 263 aaPredicted RBP10.9□□□□□ -0.66
TGFB3-201ENST00000238682 ORC4O43929 436 aa10.9□□□□□ -0.66
TGFB3-201ENST00000238682 RCAN1P53805 252 aa10.9□□□□□ -0.66
TGFB3-201ENST00000238682 ZNF296Q8WUU4 475 aaPredicted RBP10.9□□□□□ -0.66
TGFB3-201ENST00000238682 ZIC5Q96T25 663 aa10.9□□□□□ -0.66
TGFB3-201ENST00000238682 KIF2CQ99661 725 aa10.9□□□□□ -0.66
TGFB3-201ENST00000238682 POLR2AP24928 1970 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms