RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 C1orf53Q5VUE5 145 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 DZIP1Q86YF9 867 aaKnown RBP10.32□□□□□ -0.76
IFT43-201ENST00000238628 SSH1Q8WYL5 1049 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
IFT43-201ENST00000238628 NKX2-4Q9H2Z4 354 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 TXNRD2Q9NNW7 524 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 GAKO14976 1311 aa10.32□□□□□ -0.76
IFT43-201ENST00000238628 TBC1D12O60347 775 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 IL15P40933 162 aaPredicted RBP10.31□□□□□ -0.76
IFT43-201ENST00000238628 BTDP43251 543 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 Q3C1V9 767 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 ANO1Q5XXA6 986 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 SPTY2D1Q68D10 685 aaPredicted RBP10.31□□□□□ -0.76
IFT43-201ENST00000238628 CCDC102BQ68D86 513 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 CCDC174Q6PII3 467 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 ZNF280CQ8ND82 737 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 PORCNQ9H237 461 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.31□□□□□ -0.76
IFT43-201ENST00000238628 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
IFT43-201ENST00000238628 FLRT1Q9NZU1 646 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 COG5Q9UP83 839 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 ZDBF2Q9HCK1 2354 aa10.31□□□□□ -0.76
IFT43-201ENST00000238628 PQBP1O60828 265 aaKnown RBP10.3□□□□□ -0.76
IFT43-201ENST00000238628 UBTFL1P0CB47 393 aaPredicted RBP10.3□□□□□ -0.76
IFT43-201ENST00000238628 ADORA1P30542 326 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 CYP2C19P33261 490 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 TIMM10P62072 90 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 ERICH6Q7L0X2 663 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 OSBPL5Q9H0X9 879 aaPredicted RBP10.3□□□□□ -0.76
IFT43-201ENST00000238628 NDUFB9Q9Y6M9 179 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
IFT43-201ENST00000238628 GPR75-ASB3A0A0A6YYF3 556 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 FAM196BA6NMK8 535 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 ZBTB22O15209 634 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
IFT43-201ENST00000238628 GLRX3O76003 335 aaKnown RBP10.29□□□□□ -0.76
IFT43-201ENST00000238628 LDHCP07864 332 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 HERVK_113P62684 666 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 ERVK-9P63128 1117 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 ERVK-24P63145 666 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 RASGRF1Q13972 1273 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 WDR78Q5VTH9 848 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 SLC44A5Q8NCS7 719 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 TRPV1Q8NER1 839 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 TBC1D2Q9BYX2 928 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 CD320Q9NPF0 282 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 RBPJLQ9UBG7 517 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 PA2G4Q9UQ80 394 aaKnown RBP10.29□□□□□ -0.76
IFT43-201ENST00000238628 HDAC5Q9UQL6 1122 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 MROH7-TTC4A0A0A0MT08 1334 aa10.29□□□□□ -0.76
IFT43-201ENST00000238628 RFX7Q2KHR2 1363 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 PRRC2BQ5JSZ5 2229 aaKnown RBP10.28□□□□□ -0.76
IFT43-201ENST00000238628 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 ALADP13716 330 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 MECOMQ03112 1051 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 PPIGQ13427 754 aaKnown RBP eCLIP10.28□□□□□ -0.76
IFT43-201ENST00000238628 LRRC41Q15345 812 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 TMEM240Q5SV17 173 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 HLA-CQ95604 372 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 XAGE2Q96GT9 111 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 PHOX2BQ99453 314 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 AS3MTQ9HBK9 375 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 COPRSQ9NQ92 184 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 TMOD4Q9NZQ9 345 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 ZNF521Q96K83 1311 aa10.28□□□□□ -0.76
IFT43-201ENST00000238628 LRRC37A2A6NM11 1700 aa10.27□□□□□ -0.76
IFT43-201ENST00000238628 A0A1B0GUL7 405 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 E9PSI1 815 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 MAP4K4O95819 1239 aaPredicted RBP10.27□□□□□ -0.77
IFT43-201ENST00000238628 CYBAP13498 195 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 CAP2P40123 477 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 RHBDL3P58872 404 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 GSTO1P78417 241 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 ALDH1L2Q3SY69 923 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 RASIP1Q5U651 963 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 AKAP2Q9Y2D5 859 aa10.27□□□□□ -0.77
IFT43-201ENST00000238628 PDS5AQ29RF7 1337 aaKnown RBP10.27□□□□□ -0.77
IFT43-201ENST00000238628 LOC285556D6RIA3 1793 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 SLC15A5A6NIM6 579 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 DCDC2CA8MYV0 355 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 APBB1O00213 710 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 TIMP1P01033 207 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 HOXA7P31268 230 aaPredicted RBP10.26□□□□□ -0.77
IFT43-201ENST00000238628 TFCP2Q12800 502 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 RRP1BQ14684 758 aaKnown RBP10.26□□□□□ -0.77
IFT43-201ENST00000238628 MVPQ14764 893 aaKnown RBP10.26□□□□□ -0.77
IFT43-201ENST00000238628 PPP2R2DQ66LE6 453 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 ZNF365Q70YC5 407 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 GJD3Q8N144 294 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 NPLOC4Q8TAT6 608 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 RAI14Q9P0K7 980 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 YBX2Q9Y2T7 364 aaKnown RBP10.26□□□□□ -0.77
IFT43-201ENST00000238628 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
IFT43-201ENST00000238628 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms