RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CNGA4Q8IV77 575 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 SMYD4Q8IYR2 804 aaPredicted RBP17.61■□□□□ 0.41
DDX55-201ENST00000238146 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 CNNM2Q9H8M5 875 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDX55-201ENST00000238146 TTF2Q9UNY4 1162 aaKnown RBP17.61■□□□□ 0.41
DDX55-201ENST00000238146 TRIM66O15016 1216 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
DDX55-201ENST00000238146 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
DDX55-201ENST00000238146 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 KRT23Q9C075 422 aa17.61■□□□□ 0.41
DDX55-201ENST00000238146 PPP1R3GB7ZBB8 358 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 EIF3JO75822 258 aaKnown RBP17.6■□□□□ 0.41
DDX55-201ENST00000238146 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
DDX55-201ENST00000238146 FILIP1LQ4L180 1135 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 RASSF4Q9H2L5 321 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 ADAMTSL3P82987 1691 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 PCDH11XQ9BZA7 1347 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 PCDH11YQ9BZA8 1340 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 FAM205CA6NFA0 338 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 SEMA3EO15041 775 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 MBD4O95243 580 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 WTAPQ15007 396 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 RRP12Q5JTH9 1297 aaKnown RBP17.6■□□□□ 0.41
DDX55-201ENST00000238146 SRLQ86TD4 932 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 NAPGQ99747 312 aaPredicted RBP17.6■□□□□ 0.41
DDX55-201ENST00000238146 FAN1Q9Y2M0 1017 aa17.6■□□□□ 0.41
DDX55-201ENST00000238146 PDE8BO95263 885 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 ERVK-24P63145 666 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 C10orf67Q8IYJ2 551 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 ARMT1Q9H993 441 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 ITIH6Q6UXX5 1313 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 CTAGE15A4D2H0 777 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 GSG1L2A8MUP6 293 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 CTAGE8P0CG41 777 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 ARHGAP25P42331 645 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 DPYDQ12882 1025 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 CASP8Q14790 479 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 WHAMMP3Q1A5X7 153 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 CTAGE6Q86UF2 777 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 CTAGE4Q8IX94 777 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 SHISA4Q96DD7 197 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 GSDMAQ96QA5 445 aa17.59■□□□□ 0.41
DDX55-201ENST00000238146 TRIM75PA6NK02 468 aa17.58■□□□□ 0.41
DDX55-201ENST00000238146 LEKR1Q6ZMV7 388 aa17.58■□□□□ 0.41
DDX55-201ENST00000238146 MAGEB6Q8N7X4 407 aa17.58■□□□□ 0.41
DDX55-201ENST00000238146 FANCBQ8NB91 859 aa17.58■□□□□ 0.41
DDX55-201ENST00000238146 TOMM22Q9NS69 142 aa17.58■□□□□ 0.41
DDX55-201ENST00000238146 CCDC196A0A1B0GTZ2 297 aa17.58■□□□□ 0.4
DDX55-201ENST00000238146 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
DDX55-201ENST00000238146 RNF225M0QZC1 329 aaPredicted RBP17.58■□□□□ 0.4
DDX55-201ENST00000238146 UQCRFS1P1P0C7P4 283 aa17.58■□□□□ 0.4
DDX55-201ENST00000238146 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
DDX55-201ENST00000238146 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.4
DDX55-201ENST00000238146 NOA1Q8NC60 698 aaKnown RBP17.58■□□□□ 0.4
DDX55-201ENST00000238146 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
DDX55-201ENST00000238146 RRP15Q9Y3B9 282 aaKnown RBP17.58■□□□□ 0.4
DDX55-201ENST00000238146 PRKAB2O43741 272 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 CCT6AP40227 531 aaKnown RBP17.57■□□□□ 0.4
DDX55-201ENST00000238146 EARS2Q5JPH6 523 aaKnown RBP17.57■□□□□ 0.4
DDX55-201ENST00000238146 NUP133Q8WUM0 1156 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 CDHR2Q9BYE9 1310 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 COBLO75128 1261 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 CDC25AP30304 524 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 STAG1Q8WVM7 1258 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 ABHD10Q9NUJ1 306 aa17.57■□□□□ 0.4
DDX55-201ENST00000238146 GPTP24298 496 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 CTSWP56202 376 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 AMPD2Q01433 879 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 KRT31Q15323 416 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 GBP3Q9H0R5 595 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 MYO1AQ9UBC5 1043 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 TNS2Q63HR2 1409 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 ERICH2A1L162 156 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 IVLP07476 585 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
DDX55-201ENST00000238146 CTNND2Q9UQB3 1225 aa17.56■□□□□ 0.4
DDX55-201ENST00000238146 LRRC10BA6NIK2 292 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 N4BP3O15049 544 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 STAMQ92783 540 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 CCDC102AQ96A19 550 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 LIMA1Q9UHB6 759 aaKnown RBP17.55■□□□□ 0.4
DDX55-201ENST00000238146 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 LRRIQ3A6PVS8 624 aaPredicted RBP17.55■□□□□ 0.4
DDX55-201ENST00000238146 WNT7AO00755 349 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 TUBBP07437 444 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 MAP3K12Q12852 859 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 NCAPH2Q6IBW4 605 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 FOXR1Q6PIV2 292 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 CYP26C1Q6V0L0 522 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms