RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 SLC12A7Q9Y666 1083 aa11.83□□□□□ -0.51
PRAMEF4-201ENST00000235349 SOCS7O14512 581 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 ZBTB43O43298 467 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 ZNF500O60304 480 aaPredicted RBP11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 TSPY3P0CV98 308 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 TSPY8P0CW00 308 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 AKR1B1P15121 316 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 EPS15P42566 896 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 ZNF654Q8IZM8 581 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 TMTC2Q8N394 836 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 SMARCC2Q8TAQ2 1214 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 TMEM39BQ9GZU3 492 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 TMOD2Q9NZR1 351 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 PI4KBQ9UBF8 816 aa11.83□□□□□ -0.52
PRAMEF4-201ENST00000235349 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 SYT1P21579 422 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 RRP1BQ14684 758 aaKnown RBP11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 GPC2Q8N158 579 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 NEDD1Q8NHV4 660 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 TRPM4Q8TD43 1214 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 CHMP4CQ96CF2 233 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 PGAP2Q9UHJ9 254 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 MYH6P13533 1939 aa11.82□□□□□ -0.52
PRAMEF4-201ENST00000235349 GOLGA8AA7E2F4 631 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 H7C1D1 291 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 NCLP19338 710 aaKnown RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 CLEC10AQ8IUN9 316 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 FOXP4Q8IVH2 680 aaPredicted RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 CHAMP1Q96JM3 812 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 LLPHQ9BRT6 129 aaKnown RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 EHD4Q9H223 541 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 ZNF287Q9HBT7 754 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 NOL7Q9UMY1 257 aaKnown RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 MYO1BO43795 1136 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 MMP14P50281 582 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 HIRAP54198 1017 aaPredicted RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 JAG1P78504 1218 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 NTRK3Q16288 839 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 KIF4BQ2VIQ3 1234 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 FKBP1CQ5VVH2 108 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 SYNE3Q6ZMZ3 975 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 SWAP70Q9UH65 585 aa11.81□□□□□ -0.52
PRAMEF4-201ENST00000235349 MYH4Q9Y623 1939 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 UBE2Q2LH0YL09 131 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 BRD1O95696 1058 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 FOSBP53539 338 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 TROAPQ12815 778 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 RASA3Q14644 834 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 LARP1BQ659C4 914 aaKnown RBP11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 MIGA2Q7L4E1 593 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 PHKBQ93100 1093 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 CEP95Q96GE4 821 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 HACL1Q9UJ83 578 aa11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 GREB1LQ9C091 1923 aaPredicted RBP11.8□□□□□ -0.52
PRAMEF4-201ENST00000235349 IGKV6D-41A0A0C4DH26 115 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 MPHOSPH10O00566 681 aaKnown RBP11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 DYNC1I1O14576 645 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 STX6O43752 255 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 RTN1Q16799 776 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 TATDN1Q6P1N9 297 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 CATIPQ7Z7H3 387 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 DGKHQ86XP1 1220 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 STX8Q9UNK0 236 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 CPLX1O14810 134 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 RASGRP2Q7LDG7 609 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 TEPSINQ96N21 525 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
PRAMEF4-201ENST00000235349 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 DHX16O60231 1041 aaKnown RBP11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 GDF11O95390 407 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 MBD3O95983 291 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 GUCY1A2P33402 732 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 NOVP48745 357 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 CCDC178Q5BJE1 867 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 PRAMEF18Q5VWM3 479 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms