RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PNMA1Q8ND90 353 aa27.61■■■□□ 2.01
RRP9-201ENST00000232888 CCDC17Q96LX7 622 aa27.61■■■□□ 2.01
RRP9-201ENST00000232888 ZNF396Q96N95 335 aaPredicted RBP27.61■■■□□ 2.01
RRP9-201ENST00000232888 SPDYE2BA6NHP3 402 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 PRPF3O43395 683 aaKnown RBP27.6■■■□□ 2.01
RRP9-201ENST00000232888 SPDYE6P0CI01 402 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 UBE2HP62256 183 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 DLGAP5Q15398 846 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 FOXP4Q8IVH2 680 aaPredicted RBP27.6■■■□□ 2.01
RRP9-201ENST00000232888 PRMT6Q96LA8 375 aaPredicted RBP27.6■■■□□ 2.01
RRP9-201ENST00000232888 RBM27Q9P2N5 1060 aaKnown RBP27.6■■■□□ 2.01
RRP9-201ENST00000232888 FIBPO43427 364 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 FUT2Q10981 343 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 PCDHAC2Q9Y5I4 1007 aa27.6■■■□□ 2.01
RRP9-201ENST00000232888 ATRNL1Q5VV63 1379 aa27.59■■■□□ 2.01
RRP9-201ENST00000232888 FOSBP53539 338 aa27.59■■■□□ 2.01
RRP9-201ENST00000232888 KRT40Q6A162 431 aa27.59■■■□□ 2.01
RRP9-201ENST00000232888 TDRD3Q9H7E2 651 aaKnown RBP27.59■■■□□ 2.01
RRP9-201ENST00000232888 GDPD2Q9HCC8 539 aa27.59■■■□□ 2.01
RRP9-201ENST00000232888 TOP1P11387 765 aaKnown RBP27.58■■■□□ 2.01
RRP9-201ENST00000232888 RPS12P25398 132 aaKnown RBP27.58■■■□□ 2.01
RRP9-201ENST00000232888 GUCY1B3Q02153 619 aa27.58■■■□□ 2.01
RRP9-201ENST00000232888 GRM4Q14833 912 aa27.58■■■□□ 2.01
RRP9-201ENST00000232888 FKBP1CQ5VVH2 108 aa27.58■■■□□ 2.01
RRP9-201ENST00000232888 GPT2Q8TD30 523 aa27.58■■■□□ 2.01
RRP9-201ENST00000232888 TMEM47Q9BQJ4 181 aa27.58■■■□□ 2.01
RRP9-201ENST00000232888 XBP1P17861 261 aa27.57■■■□□ 2
RRP9-201ENST00000232888 SHMT1P34896 483 aa27.57■■■□□ 2
RRP9-201ENST00000232888 METTL16Q86W50 562 aaKnown RBP27.57■■■□□ 2
RRP9-201ENST00000232888 LZTS2Q9BRK4 669 aa27.57■■■□□ 2
RRP9-201ENST00000232888 STX8Q9UNK0 236 aa27.57■■■□□ 2
RRP9-201ENST00000232888 IGKV6D-41A0A0C4DH26 115 aa27.56■■■□□ 2
RRP9-201ENST00000232888 KIF23Q02241 960 aaPredicted RBP27.56■■■□□ 2
RRP9-201ENST00000232888 FAM173BQ6P4H8 233 aa27.56■■■□□ 2
RRP9-201ENST00000232888 OTUD7BQ6GQQ9 843 aa27.56■■■□□ 2
RRP9-201ENST00000232888 ZFPM1Q8IX07 1006 aa27.56■■■□□ 2
RRP9-201ENST00000232888 SPATA32Q96LK8 384 aa27.56■■■□□ 2
RRP9-201ENST00000232888 TCHHQ07283 1943 aa27.55■■■□□ 2
RRP9-201ENST00000232888 ARFGEF1Q9Y6D6 1849 aa27.55■■■□□ 2
RRP9-201ENST00000232888 CACNB3P54284 484 aa27.55■■■□□ 2
RRP9-201ENST00000232888 TCP10Q12799 353 aa27.55■■■□□ 2
RRP9-201ENST00000232888 SAFBQ15424 915 aaKnown RBP eCLIP27.55■■■□□ 2
RRP9-201ENST00000232888 CEP95Q96GE4 821 aa27.55■■■□□ 2
RRP9-201ENST00000232888 AIFM3Q96NN9 605 aa27.55■■■□□ 2
RRP9-201ENST00000232888 TRIM34Q9BYJ4 488 aa27.55■■■□□ 2
RRP9-201ENST00000232888 MTMR4Q9NYA4 1195 aa27.55■■■□□ 2
RRP9-201ENST00000232888 ZBTB12Q9Y330 459 aaPredicted RBP27.55■■■□□ 2
RRP9-201ENST00000232888 PLEKHA8P1O95397 391 aa27.54■■■□□ 2
RRP9-201ENST00000232888 SPDYE2Q495Y8 402 aa27.54■■■□□ 2
RRP9-201ENST00000232888 ZSCAN29Q8IWY8 852 aaPredicted RBP27.54■■■□□ 2
RRP9-201ENST00000232888 LEO1Q8WVC0 666 aaPredicted RBP27.54■■■□□ 2
RRP9-201ENST00000232888 SYAP1Q96A49 352 aaPredicted RBP27.54■■■□□ 2
RRP9-201ENST00000232888 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.54■■■□□ 2
RRP9-201ENST00000232888 ZNF70Q9UC06 446 aaPredicted RBP27.54■■■□□ 2
RRP9-201ENST00000232888 DDTLA6NHG4 134 aaPredicted RBP27.53■■■□□ 2
RRP9-201ENST00000232888 U2AF2P26368 475 aaKnown RBP eCLIP27.53■■■□□ 2
RRP9-201ENST00000232888 SH3BP5LQ7L8J4 393 aa27.53■■■□□ 2
RRP9-201ENST00000232888 CCDC82Q8N4S0 544 aa27.53■■■□□ 2
RRP9-201ENST00000232888 SRBD1Q8N5C6 995 aaKnown RBP27.53■■■□□ 2
RRP9-201ENST00000232888 NLGN2Q8NFZ4 835 aa27.53■■■□□ 2
RRP9-201ENST00000232888 ZBED3Q96IU2 234 aaPredicted RBP27.53■■■□□ 2
RRP9-201ENST00000232888 GZF1Q9H116 711 aaPredicted RBP27.53■■■□□ 2
RRP9-201ENST00000232888 TFIP11Q9UBB9 837 aaKnown RBP27.53■■■□□ 2
RRP9-201ENST00000232888 RCOR1Q9UKL0 485 aa27.53■■■□□ 2
RRP9-201ENST00000232888 CNTNAP5Q8WYK1 1306 aa27.53■■■□□ 2
RRP9-201ENST00000232888 MYO1BO43795 1136 aa27.52■■■□□ 2
RRP9-201ENST00000232888 GADD45BO75293 160 aaPredicted RBP27.52■■■□□ 2
RRP9-201ENST00000232888 AKR1B1P15121 316 aa27.52■■■□□ 2
RRP9-201ENST00000232888 SMARCA1P28370 1054 aa27.52■■■□□ 2
RRP9-201ENST00000232888 GUCY1A2P33402 732 aa27.52■■■□□ 2
RRP9-201ENST00000232888 TATDN1Q6P1N9 297 aa27.52■■■□□ 2
RRP9-201ENST00000232888 FAM151AQ8WW52 585 aa27.52■■■□□ 2
RRP9-201ENST00000232888 V9GY48 417 aaPredicted RBP27.52■■■□□ 2
RRP9-201ENST00000232888 MMP1P03956 469 aa27.52■■■□□ 2
RRP9-201ENST00000232888 EIF6P56537 245 aaKnown RBP27.52■■■□□ 2
RRP9-201ENST00000232888 CMTR1Q8N1G2 835 aaKnown RBP27.52■■■□□ 2
RRP9-201ENST00000232888 ISY1Q9ULR0 285 aaKnown RBP27.52■■■□□ 2
RRP9-201ENST00000232888 PALM3A6NDB9 673 aaPredicted RBP27.51■■□□□ 1.99
RRP9-201ENST00000232888 FZD9O00144 591 aa27.51■■□□□ 1.99
RRP9-201ENST00000232888 TTLL1O95922 423 aa27.51■■□□□ 1.99
RRP9-201ENST00000232888 ZNF280AP59817 542 aaPredicted RBP27.51■■□□□ 1.99
RRP9-201ENST00000232888 GNL2Q13823 731 aaKnown RBP27.51■■□□□ 1.99
RRP9-201ENST00000232888 PKN1Q16512 942 aa27.51■■□□□ 1.99
RRP9-201ENST00000232888 CAVIN1Q6NZI2 390 aaKnown RBP27.51■■□□□ 1.99
RRP9-201ENST00000232888 FAM177A1Q8N128 213 aaPredicted RBP27.51■■□□□ 1.99
RRP9-201ENST00000232888 GJB4Q9NTQ9 266 aa27.51■■□□□ 1.99
RRP9-201ENST00000232888 RTEL1Q9NZ71 1219 aa27.51■■□□□ 1.99
RRP9-201ENST00000232888 MAD2L2Q9UI95 211 aa27.51■■□□□ 1.99
RRP9-201ENST00000232888 HERC5Q9UII4 1024 aaKnown RBP27.51■■□□□ 1.99
RRP9-201ENST00000232888 MYSM1Q5VVJ2 828 aa27.5■■□□□ 1.99
RRP9-201ENST00000232888 FAM83AQ86UY5 434 aa27.5■■□□□ 1.99
RRP9-201ENST00000232888 DPF2Q92785 391 aa27.5■■□□□ 1.99
RRP9-201ENST00000232888 FOXP1Q9H334 677 aaPredicted RBP27.5■■□□□ 1.99
RRP9-201ENST00000232888 CERKLQ49MI3 558 aaPredicted RBP27.49■■□□□ 1.99
RRP9-201ENST00000232888 DNAJC18Q9H819 358 aa27.49■■□□□ 1.99
RRP9-201ENST00000232888 MYH15Q9Y2K3 1946 aa27.48■■□□□ 1.99
RRP9-201ENST00000232888 GOLGA6L4A6NEF3 574 aa27.48■■□□□ 1.99
RRP9-201ENST00000232888 PARP1P09874 1014 aaKnown RBP27.48■■□□□ 1.99
RRP9-201ENST00000232888 POLR3EQ9NVU0 708 aa27.48■■□□□ 1.99
RRP9-201ENST00000232888 MYH8P13535 1937 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms