RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 POLR2DO15514 142 aaKnown RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 CUTAO60888 179 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 KCNJ6P48051 423 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 ADKP55263 362 aaKnown RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SSRP1Q08945 709 aaKnown RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 TTF1Q15361 905 aaPredicted RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 NOSTRINQ8IVI9 506 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 DIS3L2Q8IYB7 885 aaKnown RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 NAPBQ9H115 298 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SERTAD1Q9UHV2 236 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 ADAM21Q9UKJ8 722 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 PCDHB6Q9Y5E3 794 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 ABCC12Q96J65 1359 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 CARD10Q9BWT7 1032 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 MAN1B1Q9UKM7 699 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZBTB1Q9Y2K1 713 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 ANKRD31Q8N7Z5 1873 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 EVA1CP58658 441 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 RASGRF1Q13972 1273 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 NCAPGQ9BPX3 1015 aa10.71□□□□□ -0.69
HLA-DOA-201ENST00000229829 VWA3AA6NCI4 1184 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 GSG1L2A8MUP6 293 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 STARD3NLO95772 234 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 CTR9Q6PD62 1173 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 PACS2Q86VP3 889 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 SPATA5Q8NB90 893 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 ZNF512BQ96KM6 892 aaPredicted RBP10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 SAMSN1Q9NSI8 373 aaKnown RBP10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 NFE2L3Q9Y4A8 694 aa10.71□□□□□ -0.7
HLA-DOA-201ENST00000229829 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 CLGNO14967 610 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 MMP1P03956 469 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 GNG11P61952 73 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 WWC2Q6AWC2 1192 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 TOGARAM2Q6ZUX3 1019 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 MIGA1Q8NAN2 632 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 WDR24Q96S15 920 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 GEMIN8Q9NWZ8 242 aaKnown RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 FBXO2Q9UK22 296 aaPredicted RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 CDHR2Q9BYE9 1310 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 CASP1P29466 404 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 LIFRP42702 1097 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 FAM193AP78312 1265 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 POSTNQ15063 836 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 LCORLQ8N3X6 602 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 PPP2R2CQ9Y2T4 447 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 PARP3Q9Y6F1 533 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 SASH3O75995 380 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 IFNAR1P17181 557 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 DNAJC21Q5F1R6 531 aaKnown RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 CT47A1Q5JQC4 288 aaPredicted RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 AKNAD1Q5T1N1 836 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 TC2NQ8N9U0 490 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 NUP133Q8WUM0 1156 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 SHISA4Q96DD7 197 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 DESI2Q9BSY9 194 aa10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 PUF60Q9UHX1 559 aaKnown RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 IQSEC3Q9UPP2 1182 aaPredicted RBP10.7□□□□□ -0.7
HLA-DOA-201ENST00000229829 FGFR2P21802 821 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 MFSD6Q6ZSS7 791 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 PDE11AQ9HCR9 933 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 PHLPP2Q6ZVD8 1323 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 PTPREP23469 700 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 BCAMP50895 628 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 TBX2Q13207 712 aaPredicted RBP10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 MTF1Q14872 753 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 LPIN2Q92539 896 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 BAG1Q99933 345 aaPredicted RBP10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 CABP5Q9NP86 173 aa10.69□□□□□ -0.7
HLA-DOA-201ENST00000229829 A0A0U1RQJ8 604 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 EIF3CLB5ME19 914 aaKnown RBP10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 PDE8AO60658 829 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 GUCY2CP25092 1073 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 ACTN2P35609 894 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 TDO2P48775 406 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 PUM3Q15397 648 aaKnown RBP10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 RTN1Q16799 776 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 ATRIPQ8WXE1 791 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 EIF3CQ99613 913 aaKnown RBP10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 CYP19A1P11511 503 aaPredicted RBP10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 ZNF18P17022 549 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 LIG3P49916 1009 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 KARSQ15046 597 aaKnown RBP10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 ALX1Q15699 326 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 EARS2Q5JPH6 523 aaKnown RBP10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 CSRNP2Q9H175 543 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
HLA-DOA-201ENST00000229829 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms