RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 PCDHB6Q9Y5E3 794 aa16.63■□□□□ 0.25
PRKAB1-201ENST00000229328 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 CDK5RAP2Q96SN8 1893 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 JMYQ8N9B5 988 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.62■□□□□ 0.257e-7■■■□□ 16.4
PRKAB1-201ENST00000229328 GRIN1Q05586 938 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 TBC1D22AQ8WUA7 517 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
PRKAB1-201ENST00000229328 BAZ2BQ9UIF8 2168 aaKnown RBP16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 HMGB2P26583 209 aaKnown RBP16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 DOK7Q18PE1 504 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 RESP18Q5W5W9 173 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 FAM163AQ96GL9 167 aaPredicted RBP16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 MXD3Q9BW11 206 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 GAKO14976 1311 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 FLT1P17948 1338 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 RASA1P20936 1047 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 SYKP43405 635 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 NPY5RQ15761 445 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 RILPL1Q5EBL4 403 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
PRKAB1-201ENST00000229328 F8W031 263 aaPredicted RBP16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 CUTAO60888 179 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 TSPY3P0CV98 308 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 TSPY8P0CW00 308 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 PNMA1Q8ND90 353 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 COA1Q9GZY4 146 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 XBP1P17861 261 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 RXRBP28702 533 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 PDE6BP35913 854 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 STAG2Q8N3U4 1231 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 SPC24Q8NBT2 197 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 ZC3H12CQ9C0D7 883 aaKnown RBP16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 ANO10Q9NW15 660 aa16.6■□□□□ 0.25
PRKAB1-201ENST00000229328 FAM237AA0A1B0GTK4 181 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 CAVIN2O95810 425 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 KRT2P35908 639 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 ANKS1AQ92625 1134 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 FBXO2Q9UK22 296 aaPredicted RBP16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 ADAMTS3O15072 1205 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 ALDH1B1P30837 517 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 CDK8P49336 464 aa16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 DHX40Q8IX18 779 aaKnown RBP16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
PRKAB1-201ENST00000229328 BIN1O00499 593 aa16.58■□□□□ 0.25
PRKAB1-201ENST00000229328 WNT7AO00755 349 aa16.58■□□□□ 0.25
PRKAB1-201ENST00000229328 C16orf86Q6ZW13 317 aa16.58■□□□□ 0.25
PRKAB1-201ENST00000229328 CERS3Q8IU89 383 aa16.58■□□□□ 0.25
PRKAB1-201ENST00000229328 MASTLQ96GX5 879 aa16.58■□□□□ 0.25
PRKAB1-201ENST00000229328 MTMR7Q9Y216 660 aa16.58■□□□□ 0.25
PRKAB1-201ENST00000229328 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 ZNF500O60304 480 aaPredicted RBP16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 PLCG2P16885 1265 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 PTPREP23469 700 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 DPCR1Q3MIW9 517 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 SLF2Q8IX21 1173 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 TNFRSF25Q93038 417 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
PRKAB1-201ENST00000229328 SCG2P13521 617 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 TIGD1Q96MW7 591 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 TMEM47Q9BQJ4 181 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 MAD2L2Q9UI95 211 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 KCNH3Q9ULD8 1083 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 KIF5BP33176 963 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 ZNF75DP51815 510 aa16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 PFKFB3Q16875 520 aaPredicted RBP16.57■□□□□ 0.24
PRKAB1-201ENST00000229328 PICALMQ13492 652 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 ISM2Q6H9L7 571 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 EYA3Q99504 573 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 TRIM5Q9C035 493 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 KCNQ5Q9NR82 932 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 GOLGA6L19H0YKK7 550 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 GRM4Q14833 912 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 CEP57L1Q8IYX8 460 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 AOPEPQ8N6M6 819 aa16.56■□□□□ 0.24
PRKAB1-201ENST00000229328 TTF2Q9UNY4 1162 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms