RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 RASSF7Q02833 373 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 ZNF654Q8IZM8 581 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 SPTLC3Q9NUV7 552 aa13.5□□□□□ -0.25
TNFAIP1-201ENST00000226225 PDS5AQ29RF7 1337 aaKnown RBP13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 CDC42EP5Q6NZY7 148 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 FLT1P17948 1338 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 MYO1BO43795 1136 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 LETM1O95202 739 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 TYRO3Q06418 890 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 SSRP1Q08945 709 aaKnown RBP13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 ERCC4Q92889 916 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 DACT2Q5SW24 774 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 CIAPIN1Q6FI81 312 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 NSUN7Q8NE18 718 aaKnown RBP13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 ALG1Q9BT22 464 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 ZNRF3Q9ULT6 936 aa13.49□□□□□ -0.25
TNFAIP1-201ENST00000226225 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 IGDCC4Q8TDY8 1250 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 LY9Q9HBG7 655 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 YDJCA8MPS7 323 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 KCNA3P22001 575 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 GTF2F1P35269 517 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 CDK8P49336 464 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 PPP4CP60510 307 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 CERS3Q8IU89 383 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
TNFAIP1-201ENST00000226225 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 CLIP2Q9UDT6 1046 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 CDC27P30260 824 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 CXCL9Q07325 125 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 CBX8Q9HC52 389 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
TNFAIP1-201ENST00000226225 KIF20AO95235 890 aa13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 FANCBQ8NB91 859 aa13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 RHBDL3P58872 404 aa13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 CLEC10AQ8IUN9 316 aa13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 SUGT1Q9Y2Z0 365 aa13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 V9GY48 417 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP1-201ENST00000226225 USP27XA6NNY8 438 aa13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 KRT85P78386 507 aa13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 RSBN1LQ6PCB5 846 aaPredicted RBP13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 IL17RAQ96F46 866 aa13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 MRVI1Q9Y6F6 885 aa13.46□□□□□ -0.26
TNFAIP1-201ENST00000226225 LIFRP42702 1097 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 TBC1D10BQ4KMP7 808 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 CD2APQ9Y5K6 639 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 LRP5O75197 1615 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 MIGA2Q7L4E1 593 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 ZNF165P49910 485 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 GPR162Q16538 588 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 CCDC96Q2M329 555 aa13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP1-201ENST00000226225 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 GDF11O95390 407 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 PSMD1Q99460 953 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 ZMYM6O95789 1325 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 CTDNEP1O95476 244 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 TNIP1Q15025 636 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 KCNJ14Q9UNX9 436 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 XBP1P17861 261 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
TNFAIP1-201ENST00000226225 OGFRQ9NZT2 677 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms